Bombus affinis (rusty patched bumble bee): 126923416
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Entry
126923416 CDS
T09368
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17 isoform X1
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
baff
Bombus affinis (rusty patched bumble bee)
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
baff03041
]
126923416
Enzymes [BR:
baff01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
126923416
Spliceosome [BR:
baff03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
126923416
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
LBD_receptor
Transformer
Motif
Other DBs
NCBI-GeneID:
126923416
NCBI-ProteinID:
XP_050592797
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All DBs
Position
13:complement(5249563..5256410)
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AA seq
566 aa
AA seq
DB search
MGRYRSPSRDRDRRRRSRSRSRSRSPRDRRNWGSSGGRDRGGGRHSRGQPGANLRKPRWD
LSRLEPFKKDFYVPHEAVKNRDLRIVEQYRSEKEITLKGKNIPNPVFTFEETGFPDYVLK
QIKRQGFTEPTSIQAQGWPIALSGRDMVGIASTGSGKTLSYILPAIVHINSQPKLGRKDG
PIALVLAPTRELAQQIQQVANDFGHSSGIRNTCLYGGAPKGAQARDLDGGVEIVIATPGR
LLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVK
NLAEDFLKDYAQINVGSLQLAANHNILQIIDVCQDYEKENKLSTLLKEIMAESENKTIVF
IETKRRVDEITRKMKCDGWPAACIHGDKTQQERDWVLQDFRSGKAPILVATDVAARGLDV
EDVKFVINFDYPSCSEDYVHRIGRTGRRQKTGTAYTFFTPNNSNKANDLIQVLKEANQVI
NPKLLELADSKSGGYGRHRGGRNRWRSRGGRNGKDRSYSRSRSRSHSREYNGRRNRRSYS
RSYSRSRSPVSNRTEVIGKSYWSSER
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgggccgctataggagtcctagtcgtgacagagataggagacgtagatctcgcagtaga
tctcgtagcagatcaccaagagatagaagaaattggggtagtagtggaggtagagatcgg
ggtggtggcagacatagccgtggtcaacctggagcaaatttaagaaaacctagatgggat
ttaagtcgactggaacctttcaaaaaagatttttatgtaccacatgaggcagttaaaaat
cgtgatttacgtatagttgaacaatacagaagtgaaaaagaaatcactctaaaggggaaa
aatatacctaatcctgtattcacatttgaagaaacaggttttccagactatgttctaaag
cagataaagcgacaaggttttactgaaccgacatcaatacaagcacagggatggccaatt
gctttaagtggaagagacatggtaggaattgcatcaacaggttctgggaaaacattatct
tatatactcccagcaattgttcacattaatagtcaacctaagttaggacgaaaggatgga
cctattgctttagtgctagcaccaacgcgagagcttgcacaacaaattcagcaagttgct
aatgattttggtcattcctctggtattagaaatacttgtctatatggtggagcaccgaaa
ggtgcacaggccagagatttagatggtggggtagagattgtcatagctacacctggtaga
ttattagactttcttgaatcagggcgtacaaatttaaaaaggtgtacctatttagtattg
gatgaagcagatagaatgttagatatgggatttgaacctcaaattagaaagatcatagaa
caaattaggccagataggcagacattaatgtggtcagctacatggcccaaggaagtaaaa
aatttagctgaagattttttaaaagattatgctcaaattaatgttggatccctacagtta
gctgcaaatcataatatattacaaattattgatgtatgtcaagactacgaaaaagaaaat
aaattaagcacacttttaaaagaaataatggcggaaagtgaaaacaaaaccatagtattt
attgagacaaaacgcagagtggatgaaataacaagaaaaatgaagtgtgatggctggcca
gccgcttgtatacatggtgacaagacacagcaagaaagggattgggttttacaagatttt
agatcagggaaagcgccaattcttgtcgcaacagatgttgctgctcgtggtcttgacgtt
gaagacgtcaagtttgtcatcaattttgactatccctcctgttcggaagattacgttcat
cgaatcggtcgaacaggtcgtcggcagaaaactggtacagcatataccttttttacacct
aataattcgaataaggctaacgacctaatccaggtattaaaagaagcgaaccaagttatc
aatccgaaattactcgaacttgccgatagtaagagtggtggatatggcaggcatagaggc
ggaagaaatagatggcggtctcgaggtggccgaaacggaaaagatcgtagttactcgaga
agtagaagtcgaagtcacagtagggaatacaacggtcgtcgtaatcgtcgcagttacagt
cggagttattctcgaagtcgtagccctgttagcaatcgtacagaagtgattggtaagagc
tactggagtagcgagagatga
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