Bombus affinis (rusty patched bumble bee): 126923492
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Entry
126923492 CDS
T09368
Name
(RefSeq) cyclin-T isoform X1
KO
K15188
cyclin T
Organism
baff
Bombus affinis (rusty patched bumble bee)
Pathway
baff03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
126923492
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
baff03021
]
126923492
Transcription machinery [BR:
baff03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Super elongation complex (SEC)
126923492
Brd4/P-TEFb complex
126923492
7SK RNP complex
126923492
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CycT2-like_C
Cyclin_N
TFIIB
Motif
Other DBs
NCBI-GeneID:
126923492
NCBI-ProteinID:
XP_050592937
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All DBs
Position
13
Genome browser
AA seq
1422 aa
AA seq
DB search
MAADEKWYFTKEQLINTPSRRCGIDADKELSYRQQAANFIQDMGQRLVVSQLCINTAIVY
MHRFYVFHSLSHFHRNAIAAAALFLAAKVEEQPRKLEHVIKMAHMCLHRDQPPPDVRSEQ
YLEQAQDLVFNENVLLQTLGFDVAIDHPHTHVVRCCQLVKASKDLAQTSYFMASNSLHLT
TMCLQYKPTVVACFCIHLACKWSNWEIPQSTEGKHWFWYVDRSVTSELLQELTAEFLHIF
DKCPSRLKRKIMSISANQSPSINHPSLPNSPFDAEPRKVQSPATTADGGPTFHTNRPHQV
EKQEEKKQNAPAPARPPVDYREYREKKERERLEREKASVPTSVAQSHVSDINKHHSHHHK
PVSSTNVLNKHPLPLGQKALHHNHHHRPDIKVGQPVPQRHSSSTQAREPNRDPNRQRLQR
EYNSNTGISSSSCSSGNALHSHSHVVSKEPTLDNSITDSVTHRSDVGSLQEPTSHGNIQE
KLSNNNHSLHRLSGVESKHQGHDKRMYDPRHKPVEHRKDSEQKPYKYPDPTRIDRQRKSD
TLEQRCEEVRKLIEKSILPPKPTLDVPYSSNTQKPSSHHIKYNQSEKLQVSTGAVPTDVK
LSTSQSSFPQEKSPSSSVSLLSQKSLSSKTISSQHTAHGVSQILKDTIKNSNSQSSSLSS
LNNLDDPKTEKRPRHDDTDKSSSDIQQSVLQTPPGKPKSIFSPEKVPTPRESHSQRLKTK
QKTPPSAVKVPKQERVPDTSIGFNLVSPFASPAGLQQQETQSVKRSANDVSATSHKRHRT
CSTSESGQQVKIKMDDTTSSFEAVKMLGRVPELIQPIRDNPSANGRATQIANDMKPPELI
KPFDSEPTISRFSTIPTQQQISSNQQGLTNGLDTNLVKQEPQEFQIKKETYKTDIPIKAE
HQIKGEYLSPMKSAQSISALLQEPLAPMPSLLQNMQQFSQIPPQQQVHQEQFQQQQLQQQ
QLQHEQPLQPQHQPSISHSMLLAQQEPVQSQCLPLSSVTEPMIASTVDISALSGPVQTNT
ESILSIPISTTITVAPPVEEKRSEHHKSEKKKKKEKHKHKDKEKSKEKHKHKHKDKDKEK
HREKEKEKGEETVPAVPIKITIPKDKLNLSTESTGSTGASTVPTDKNKSPQNTSIKIIIP
KERLKGTDSVSSSPGQSVVQAPLKIKIRTDGISRSSGAPSTTGSSSSIVPEFTNESRKRD
RSEMKESPTTSVPPTKKQSQVSSAGYGQHRLGERQNGRHYSSGSNNKVRGGGRGGRQYIG
RGPPPAGSAGHYSAPGQRDGYYQQDTYNSNNARNPHHPHPSSARGDPGYSRAGHVNQTQQ
DSYFFANYPPPSMFNPAGYIYDPVMYYSQYQQQYPMYPAGNVIMTPDGAIDTSVPPPSLP
PNMRQNQSMMPVPSARQEPKTPPPLPSGPPPSSSPPPPPPPE
NT seq
4269 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgacgaaaaatggtactttacgaaagaacagctaataaatacaccgagcaga
agatgcggcatcgacgcggataaggaactgagctacaggcagcaggcagcgaatttcatt
caggatatgggacagcggcttgtggtgtcacaattatgtatcaacacagcaatagtgtat
atgcacagattttatgtattccattcgctgtcacatttccacaggaatgcaattgcagca
gcagcactatttttagcagcaaaagtagaagaacaaccacgcaagttggaacatgttatc
aaaatggcacacatgtgtctccacagagatcagcccccacctgatgtcaggtctgagcaa
taccttgagcaagctcaagatctggtgttcaatgaaaatgttctactacaaacattgggg
tttgatgtcgccattgatcatccccacacacatgttgttagatgttgtcaactggttaaa
gcgagcaaggacttagcccagacttcatacttcatggcatctaacagtttacatttaaca
accatgtgtctgcagtacaagccaacggtagttgcctgcttttgcattcatcttgcatgt
aaatggtctaattgggagataccacaaagtacggaagggaagcactggttttggtacgtc
gacagaagtgtgacatccgaactattacaagagcttacagcagaattcctccatatattt
gataagtgcccgtcaagattgaaaagaaaaataatgagcatatctgctaatcaaagtcca
agcattaatcatcctagtttaccgaactcaccctttgatgcggaacctcgcaaggtacaa
tctcctgcgacgacggccgatggtggacctacattccacacaaatcgacctcatcaggtg
gagaaacaagaagaaaagaaacagaatgctcccgcacctgcgagacctcctgtagattat
cgggaatatcgagaaaagaaagaacgcgagcgtttggaaagagagaaggcatcagttcca
acatcagttgcgcaaagtcatgtatcggatattaataagcatcattctcatcaccataaa
cctgtatctagtacaaacgtgctgaacaaacatccgttgcctcttggacagaaggcactt
catcacaatcatcatcatagaccagatataaaagttggacaaccggtacctcagaggcac
tcgagtagtactcaagctagggaaccaaaccgcgatcccaataggcagaggttacaaaga
gagtacaattcgaacactggtataagtagcagtagttgtagtagtggtaatgctctccat
tctcacagtcacgttgtatcaaaagaaccaactttggataattctataaccgattccgtt
actcacagatcggatgttggatcattacaagaaccaacatctcatgggaatatacaggag
aaacttagtaataataatcatagtctgcacagattaagtggagtagaaagtaaacatcag
ggtcatgataaaagaatgtatgatccaaggcataaaccagtagaacataggaaagatagt
gaacaaaagccatataaatatccagatccaactagaattgatcgacaaagaaagtctgat
acattggagcaaaggtgtgaagaggttaggaagctcattgagaagtcaatacttccacct
aaaccgacgcttgacgtaccatatagttcaaatacacagaaaccgtcgtcacatcatata
aaatacaatcagtcagaaaagttacaagttagtactggtgcagtgccgactgatgtgaag
cttagtactagccagagttcatttccgcaagaaaagtctccgagtagctccgtttcattg
cttagtcaaaaatcattatcttcgaagacaatatccagtcaacatacagctcatggtgta
tcacagatattaaaggacacgattaaaaatagtaattctcagtcgtcgagtttatcatcg
ttgaataatcttgatgacccaaaaactgaaaaacgaccacggcatgatgacacagacaaa
agttcgtccgatatccaacaaagtgtgttacaaaccccccctggcaagccaaaatcgata
ttcagtccagagaaagtaccaacgcctcgggaatctcattcacagaggcttaagactaaa
caaaagacgccgccttcggctgtaaaagttcctaaacaagaacgcgtaccagacacatca
ataggctttaatttagtatcaccttttgcaagcccagcaggtttgcaacagcaagaaacg
cagtcggttaaacgatcggctaacgatgtttctgcaacgtcccataaaaggcatcgtacg
tgtagcactagtgaaagtggacagcaagtgaaaataaaaatggatgatacgacgtccagt
ttcgaggcggttaagatgctcggtagagtaccagaactgatacaacctattagagacaat
ccatcggcgaatggtagagccactcaaatcgcgaatgatatgaaaccaccggaactcatt
aaacctttcgattctgaaccaacgatatcacgttttagcacaatacctacacagcaacag
atatcatcaaatcagcagggtttgacgaatggactggatactaacctagtgaagcaagag
cctcaagaattccaaattaaaaaggaaacctataaaacagatataccaataaaggctgaa
catcagattaaaggagaatatttatctccaatgaaatctgctcaaagtataagtgctctg
cttcaggaacctttagcacctatgccatcgttattacaaaatatgcaacaatttagtcaa
ataccacctcaacagcaagttcatcaggaacaatttcaacaacagcagttgcaacagcag
caacttcaacatgaacaaccactacaacctcaacatcaaccatcgatatctcattcgatg
ttgctcgcacagcaggaacccgttcaaagtcagtgtctgcctctatcatcggttaccgaa
ccaatgatagcttcgaccgtagatataagtgctctctctggccctgtacaaacaaataca
gaatccattctctctataccaatatcgactaccataaccgtcgcaccccctgtagaagag
aagagatcggagcatcacaagagcgaaaaaaagaagaagaaagagaagcataagcataaa
gacaaggagaagagtaaagagaagcataaacacaagcataaagacaaggacaaagaaaag
catcgagagaaggaaaaagaaaaaggagaagagactgtgcctgcggtacctatcaaaatc
acaattcctaaagacaaattaaatctgagcacagaatcgacaggaagcaccggtgcgagt
acagtgccaactgacaagaacaagtcgcctcaaaacactagtatcaaaatcattattcct
aaggaacggctgaagggtacggacagtgtatctagttcaccgggtcagtccgtagttcag
gctccgttaaagattaaaatccgaacggatggaatctcgaggagttccggcgcgccctcg
acgacgggtagttcgagcagcatcgttccagagttcacgaacgaaagtcgaaagcgcgat
cgttctgaaatgaaggagagtccgacgactagtgttccgccaacgaagaagcaatcgcag
gtctcctcagcgggttacgggcaacaccgactaggcgaacggcagaacggcagacactat
agttcaggcagcaataacaaggtacgtggaggcggtagaggcggccgccagtatatcggg
cgtggtccaccaccagcaggatcggcgggccattacagtgctcccggccagcgcgacggc
tactatcagcaagacacctacaatagtaacaatgcccgtaatccacatcatcctcatcca
tcctcagctcgtggtgatccaggctactcgagggctggccacgtaaatcagacccaacaa
gattcttatttttttgctaattacccgccaccctcgatgttcaaccctgccggatacatt
tacgatcctgtcatgtactattcgcaatatcagcagcagtacccgatgtatccggcgggt
aacgtcattatgacaccagacggtgctattgatacgtctgtaccgccaccatccttacca
ccgaatatgcgacaaaatcaaagcatgatgccagttccgtctgctcggcaggaacccaag
acaccaccaccgttaccgagcggaccacctcctagttcctcaccaccaccacctccacca
ccggaataa
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