Bombus affinis (rusty patched bumble bee): 126923850
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Entry
126923850 CDS
T09368
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm8
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
baff
Bombus affinis (rusty patched bumble bee)
Pathway
baff03018
RNA degradation
baff03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126923850
09123 Folding, sorting and degradation
03018 RNA degradation
126923850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
baff03019
]
126923850
03041 Spliceosome [BR:
baff03041
]
126923850
Messenger RNA biogenesis [BR:
baff03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
126923850
mRNA degradation factors
5'-3' decay
Lsm complex
126923850
Spliceosome [BR:
baff03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
126923850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF150_C
Motif
Other DBs
NCBI-GeneID:
126923850
NCBI-ProteinID:
XP_050593707
LinkDB
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Position
14:6512742..6514123
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AA seq
96 aa
AA seq
DB search
MASGLESYVNHTVSIITSDGRNFIGTLKGFDQTINIILDESHERVYSTTQGVEQVVLGLH
IIRGDNVAIVGELDDEMDARLDLSAIRADPLSSIVH
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaggtttagaaagctacgtaaatcatactgtttctattattacttctgatggc
agaaacttcatcggaacattaaagggatttgatcaaactattaatataatattagatgaa
tctcatgaacgtgtgtacagtacaacgcaaggtgtagagcaagtagtattaggtttacat
atcatcagaggtgacaatgtggcaatcgtaggagaattggatgacgagatggatgcacgt
ttagatctatcagctataagagctgatcctttaagttctattgtacattga
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