Bombus affinis (rusty patched bumble bee): 126923952
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Entry
126923952 CDS
T09368
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B isoform X1
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
baff
Bombus affinis (rusty patched bumble bee)
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
baff03021
]
126923952
Transcription machinery [BR:
baff03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
126923952
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Rrn7_cyclin_N
Zn_ribbon_RRN7
WHD_RIOX1
FtrD-like
Motif
Other DBs
NCBI-GeneID:
126923952
NCBI-ProteinID:
XP_050593863
LinkDB
All DBs
Position
14:7814752..7820028
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AA seq
972 aa
AA seq
DB search
MQKCRICGSKDFYKEAGYFFCQTCQTQNEDIRDEVLELRIDSTTRLRKTRIRQLKSDISG
NEVGWTSWELYNFVLIGLTNELIELGVPSDIKLTILQLWATYLGKLEVAFISTRKKSMPK
LARRYKKRDADIIYGKVQSEKTSRKRKRPRSNTSIISGTSITGLSEGSSMRELNKNKRLL
IAADYDRYLQSQNSSEGDGLSMLSQSQSIYSGQSSSVKSSENEGKVQFSSHAKEEARKIK
RLSKNIPRFERVQYRAKHISTQYKMGPNIITPMRLWAIIYLALRIHNQPIQLGDMLRYGR
EGHLSYYKLDHLLPPELNLTANERSFLTQNVEITHKGMRRIIASMAKLLGAWNIVCPDFL
SLVNRYCQELGLPRGIQLYTERLIALSPPKMIFDAKMSCIPNYEGRAMAFIIVVLKTLLA
LDGVTEYRISRIAERINSTAIERGLLDNKLFSFQEWQKYIECRKTILMHAHYPTKMKYCP
DADGIDDLYLKFLEFISSKSNKNEQEIKNSKHYLPQEIISAMGKHISNINIDDSSPMAID
IFPPSLTPLRSYLQHLLDHPLYDIPNIARSDFFLTRIGYMTKSDALVELAAKCGMELEIV
DSNVHFLEKNVPPFEQPRMPSINELKQLIDVQDDLQDEEDRSESVNDYLHAKTPCSIKFD
TTKNQYYDSTVSTMKDSANVFAENDFTFTETLPNGKLAIPVDSDSENEEDLGSNGLDQWT
LLENKLRDKYNIHLSLAEKEAIHKSNGVKKTHSKESKIQLKRNTKGQFIKRSAAPIKIEK
SDAEFFAATENVNFYDNIDTRVINDKHIEVESTEKNQLLFPENISISDINIDDTNINIDH
FDINEYLNFSDISFFSQNDILAPVTSKEETVVKEKDIFFKPFTEYWMYDCIFSRVKSKNF
AIFEKSLPRTFRWLLNECALIVEMSTEDLYEEVCLIENYYSHISNSSTPDSSERTNIDSI
SKSQLNFILNKW
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaagtgcagaatttgcggcagtaaagatttttacaaagaagctggatatttcttt
tgtcaaacgtgtcaaacgcaaaatgaggatatcagagatgaagttcttgaattacgtata
gatagtacgactagattgcgaaaaacaagaattaggcaattaaaatctgatatatcaggt
aatgaggttggatggacttcatgggaattgtacaattttgttttaattggtttaacaaat
gagctaatagaacttggagttccatctgatataaaattgacaatattacaattatgggca
acatatttaggcaaacttgaagtagcatttatctcaactagaaagaaatctatgcccaaa
ttagctagaagatataagaaaagggatgcagatattatttatggcaaggtgcaatcggag
aaaacatctaggaagcgcaaaagacctagaagtaatacttctattattagtggaactagc
attaccggacttagtgagggtagttctatgagagaattgaacaaaaacaaaagacttctg
atagcggcagattatgatagatatcttcagtctcaaaatagttctgagggtgatggtctt
agtatgcttagtcaaagtcaaagtatatatagtggtcaatctagttctgtgaaatcatca
gaaaatgagggaaaagtacaatttagttcccatgccaaggaagaagcaagaaaaattaaa
agattatcaaaaaatatacctagatttgaaagagttcaatacagggcgaaacacataagt
actcagtacaaaatgggacctaatataattacacctatgcgactatgggcaattatatat
ttagctttaaggatccataatcaacctatacaattaggagatatgttaagatatggaaga
gaaggacacttgtcttactacaaattggatcatttattaccgccagaactgaatttaaca
gcaaatgaaagaagcttcttaacacagaatgttgaaattacacataagggcatgagacga
attattgcaagtatggcaaaattacttggtgcatggaatatagtttgtcctgattttcta
tctttagttaacagatattgtcaagaactaggattaccaaggggcatccaattatataca
gaaagactaatagctttatcacctcctaaaatgatatttgatgcaaaaatgtcatgcatt
cctaactatgaaggtcgtgcaatggcatttattatagtagtgctgaaaactttacttgct
ctagatggtgtaactgaatatcgcattagtagaattgcagagaggatcaacagcacagct
attgaacgcggcttactcgataataaactttttagttttcaagaatggcaaaaatatatt
gaatgcagaaagacgattttaatgcatgcacattatccaaccaaaatgaaatattgcccc
gatgcagatggaatcgacgatttatacttaaaattcttagaatttatatcttctaaatcg
aataagaatgaacaagaaataaaaaattctaaacattatttgccacaagaaattataagt
gctatgggaaaacacataagtaacataaatatcgatgattcatcgccaatggcaattgat
atatttccaccatctctaacacctcttcgttcgtacttgcaacatttattagatcatccg
ctttacgatattcctaatatagcacgaagtgatttttttcttacaagaattgggtacatg
acaaaatctgatgctttagtagaattagcagcgaaatgtggcatggagttagagatagtc
gattcgaacgtacattttctcgaaaaaaatgtacctccatttgaacaacctagaatgcca
agtataaatgaactaaaacagcttatcgacgtgcaagatgacttacaggacgaagaagat
agaagcgaaagtgtgaatgactatttacacgctaaaacaccatgtagcattaaatttgac
actactaaaaatcagtattacgatagtactgtaagtacaatgaaagattctgcaaatgtc
tttgcagaaaatgattttacatttaccgaaactctgccaaacgggaaattagcaatacct
gttgatagcgatagtgagaacgaagaagatttagggagcaatggtttggatcaatggacg
cttttagaaaataaactacgtgataaatataacatacatttatcactagcagaaaaagaa
gccattcataagtcgaatggagtgaaaaaaacacattccaaagaatctaaaattcaactt
aagagaaatactaagggtcagtttattaagcgtagtgctgcgcctataaaaattgaaaag
agtgacgccgagttttttgctgcaacagagaatgtaaatttttacgataatatcgacaca
agagtcataaatgataaacatatagaggttgaaagtactgaaaaaaatcagttattattc
cctgaaaatatcagtatcagtgacattaatattgatgacacaaatataaatattgatcat
tttgatataaatgagtatcttaatttcagcgacatttcattttttagtcaaaatgacatt
cttgcacctgtaacaagtaaggaagaaactgtagtcaaggagaaagatatattttttaaa
ccctttacagagtactggatgtatgactgcattttcagccgcgtgaaatcaaaaaatttc
gctatattcgaaaaatcattaccacgaacttttcgttggctactaaacgaatgtgcactt
attgtggaaatgtctacagaagatttatacgaagaagtctgtttaatagaaaattattat
tcacacatttcaaattctagtacccctgacagtagtgaacgtaccaacatagattcaata
tctaaaagtcaattgaactttattttaaataaatggtaa
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