Bombus affinis (rusty patched bumble bee): 126923957
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Entry
126923957 CDS
T09368
Name
(RefSeq) DDB1- and CUL4-associated factor 10 homolog isoform X1
KO
K11802
DDB1- and CUL4-associated factor 10
Organism
baff
Bombus affinis (rusty patched bumble bee)
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
baff04121
]
126923957
Ubiquitin system [BR:
baff04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
126923957
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Gene cluster
GFIT
Motif
Pfam:
WD40
WDR55
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WD40_Prp19
Beta-prop_EML_2
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
ANAPC4_WD40
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_VPS8
Beta-prop_DCAF12
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
Beta-prop_Vps41
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
126923957
NCBI-ProteinID:
XP_050593872
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Position
14:complement(7788610..7794494)
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AA seq
672 aa
AA seq
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MPRIKTKQASSLWLRQRELGVQFSLGHADHFHKTLYSSIQPVTSWDHALSAAAAHGGVFN
LEYSPDGSLLLAACEKKSILMFDPLRRSLIHAIDNAHNDCVNCVRFLDQRMFATCSDDST
VALWDARNLKNRIRTLQGHSNWVKNIEYSPKDNLLLTSGFDGSIYTWDINSFTENSILYT
RVFHTNGLMRTRLSPDASKMLISTTSGYLIIIHNLKLSTLTQDLAGFRPNMYRLMQSSQT
TIPNVASFTHLFSHSRTHNRVEFLTDFPVGDDAEIISSLQVHPHGWCVLSRNVSNGEKSE
WTCIHDIQERDVSSTADQAKEGEETTPPFNEMSVEEFNDFQLPRPSRSGITSSFLIESPN
RVRVVHTTADTRPTMTGFSDNAQSTRSPRNNWQSVSRRVSRSQSRNSRMDRNATRANFGS
IEVSSSSSSSDSRVNTDRDDRQGDRYIYAADIYAADESILEEGSGDQERESGQDYRPRPN
VHLNYLRPRNIIENFPTGNIELHVSTTDVWEAHVAIREARLRRERDWLSRSSNNTVVIIG
DRIRVQNRNRLGQQTMYAIPRNRMIHQNTPRLTHYIEEPNVGSGYIKELCFSADGRLICS
PFGYGVRLLGFSENCSELSNCVPPYNESIQLNEIAINTSHSGIVVCTKFSPRHCLLVSGC
LSGRIVWHQPVV
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgcccaggataaaaaccaaacaagcaagtagcctttggttaaggcaacgcgaattgggt
gtacaattctctttgggacatgctgatcactttcataaaactctttactcctctatacaa
ccggtaacttcttgggatcatgcgttatctgcagccgctgctcatggtggagtttttaat
cttgaatattccccagatggctctcttttgttggcggcatgcgagaagaaaagtatttta
atgtttgatcctctgaggagaagcttgatccatgcgattgataatgctcataatgattgt
gttaattgtgttaggtttttggaccaacgtatgtttgcaacatgttcagacgatagtacg
gtagctctctgggatgctagaaacttaaagaatagaataagaactcttcaaggtcattcg
aattgggtgaagaatatagaatatagtcccaaagataatttactactaaccagtggtttt
gatggtagcatatatacttgggacattaatagtttcacagaaaatagtattctttatacg
cgtgtgttccatacaaacggactgatgcgaaccagacttagtccagatgccagtaaaatg
ttaataagtactacttctgggtacctcatcattatacacaaccttaaattaagcacttta
actcaggacttggcaggatttagaccaaatatgtatcggttaatgcaatcgtctcaaact
acaataccaaacgtggcaagtttcacgcatctcttttcccattctcgtacacataaccga
gtagaatttttaaccgatttccctgttggcgatgatgctgagataatatcgagtttgcaa
gtgcaccctcatggatggtgtgttttgtctaggaatgtcagtaacggagaaaaatctgag
tggacttgtattcatgacatacaagagcgtgatgtatccagcacagcggatcaggcgaaa
gaaggagaggagacaacaccgccgtttaacgaaatgtccgtagaagagttcaatgatttt
caactccctcgaccttctcgttcgggtataacatcttcttttttaatagaaagtccaaac
cgcgtgagagttgttcatactacggccgatacgagaccgaccatgactggattttcagat
aacgcgcaatcaactaggtccccgagaaataattggcagtcagtgtcacgtagagtgtca
cggtcgcaatcgaggaattcgcgtatggacagaaatgcgacaagagcgaatttcggttcg
atcgaagttagttctagttcaagctcgtctgattctcgtgtaaacacggatagagacgat
agacagggggacaggtacatatacgccgctgatatttatgcggctgatgagagcatactg
gaagaaggttctggcgatcaagaaagagaatcaggacaggactacaggccgagaccaaat
gttcaccttaattacttaagaccacgcaatataatcgaaaattttcctactggtaatata
gagttacatgtaagtacgactgacgtctgggaagcacacgtagcaattagggaagctagg
cttagaagggagagggattggctttctagatcgagtaacaatactgtcgttattatcggt
gatagaattagggttcagaatcggaataggctaggccagcaaacaatgtacgctattccg
agaaaccgcatgatccatcaaaatacacctagattaacgcattacatagaggaacctaac
gttggttccggttatataaaagaattatgtttctctgccgatggccgactaatatgttca
ccgtttggttacggagtacgtttgctaggattttctgaaaattgttcggaattatctaac
tgtgttcctccctacaacgagtctatacagttaaacgaaatagcgataaacactagtcat
tctggcattgtagtctgtacaaaattttctccaaggcattgtttgcttgtgtcaggttgt
cttagtggaagaatcgtttggcatcaacctgtagtttag
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