Bombus affinis (rusty patched bumble bee): 126924107
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Entry
126924107 CDS
T09368
Name
(RefSeq) RRP12-like protein isoform X1
KO
K14794
ribosomal RNA-processing protein 12
Organism
baff
Bombus affinis (rusty patched bumble bee)
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
baff03009
]
126924107
Ribosome biogenesis [BR:
baff03009
]
Eukaryotic type
90S particles
Other 90S particles
126924107
Pre-60S particles
Other pre-60S particles
126924107
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
Ig_GEX2_N
UTP20
YdjC
DHR-2_Lobe_A
Motif
Other DBs
NCBI-GeneID:
126924107
NCBI-ProteinID:
XP_050594184
LinkDB
All DBs
Position
14:complement(432879..439556)
Genome browser
AA seq
1296 aa
AA seq
DB search
MGKLGPRLSSRKKAKRWPKGQSSSSNPQTKKHREQASWIFFKDSTASAKPGITKEDLKKH
NAIQGIEPQVETLDSEDNSWETCTENTADTFATNYSNCSNISFSRFLNHFQSKSLLHKEM
LAVLSAVTEIIKQHGGNESSTEYFAALMSTLEAIESDTSIAATLSLLGMGLKTVPKNVLN
IQFGAASRIFLNILVKYASSEEYLILRHCIHCLSVLLRAQEAATWSSSSTMQVLDVILSF
TIHYKPKLRKSAQHGICAILNGSDIMKSENPPQYHPATPYIAKFCIGQLDSKSDGITNVL
HVLTLLKDIFHHLPKIHVKTISESLLKLMTMKNVLVTSCCLQTFHGLFVSRPSEAILPVQ
RNGQIITALYDYQPPATDTQPTLAWLTVMQEAYLNLAHNSLNLCAVLLPRILDRCMQLWL
SDKSEVISGSSHTIKILLQDCVGKICETEESMKTYKDTINQITSMIHQALGYQYLEAWYH
ILHLIALLFQVTGKARSPQLIEILKTLAELRDSYNFASKNDAEYAIGAAIRVLGPETILN
LIPLKVSDNAINLKRTWLLPLLKDCVLGGSLTFFMEILLPIVALCEKKATEPVGGKTYEF
LVCQIWAILPSICNNATDVKDNFKNIARLLGTNLNERKNLRMSIMSALRRLITKAVEDDK
KEDIHELARFAKNYLPLFLNLYTTKPLGTDEEGQRFATYDTIRVYLTITDKELVHELFDR
ALFKLKEPDIDDFFKESIHDIIRLFINYTDINRLKTFYDMSVPLLKEISKTKEQKKAYRF
LEEICGSEKETCKEFVVQYRREIQKLLISSATEVAKPSRGARLRCLIHLIKIHPQLEKTK
FLEAIVPEAVIYLKDLNTKCRTSAYQLLNTIAEKFLQNPTNLKEYVNMLMVGLSGAIENI
QKYCTASLLALSSITYHYNGSLGIETVKEILGQACIFVTSPTREIAEAALAYIKVYITVI
PSHIAASNLKLLIDGLCAMNDDCHRHFRQKVRDILVKLIRKYGMETISGMIPASNAMLHK
RLKNMNKAEEAKKKKNELRKLKKQENDEDTEFSAKRKPKSMEEILADSDDEFDEDMDNEE
SRKKKKRTSRKEAWIHENEEIVDLVDPAAARNISTTQPTVAINSKIAAIKRKDREFKTTS
DGRLIITVDNEKDNEPEPKRKKKSALLLHSDSEDDYEDDVQSVAMSQAMDKKRKYSDSYD
NISVRSGSTLKYQAGGSGIHRPLKKSRTEYIPGAEYKASKAGGDVKRKGKPDPYAYVPLS
RAALNKRKKKKNASKFQNIIKGAKKGAKIGMKQRKN
NT seq
3891 nt
NT seq
+upstream
nt +downstream
nt
atgggtaagttgggaccgcgtttaagtagccggaaaaaggcgaaacgttggccgaagggt
cagagctccagttctaatccacaaactaaaaagcatcgggaacaggcatcctggatattc
tttaaagattcaacagcctctgcgaagcctggtataacaaaggaagatttaaaaaaacac
aatgctattcaagggattgaaccacaggtagaaacacttgatagcgaagataactcttgg
gaaacatgcacagaaaatactgctgatacctttgctaccaattatagtaattgttcaaat
atatcatttagtaggtttttaaatcattttcaatcgaaatcactgttgcataaggaaatg
ttagctgtgttgtctgctgtaacagagattataaaacagcatggtggtaatgaatctagc
acagaatattttgctgcattgatgagtactttggaagcgattgaatcggatacatcaatc
gcagctacactctctttattaggcatgggcctaaaaactgtcccaaaaaatgttttaaat
atccaatttggagctgcaagtagaattttcttaaatatcctagttaaatatgcatcgtcg
gaagagtacctaatacttcgacattgtattcattgtttatctgtgctccttcgagcacaa
gaagcagccacatggtctagttcatctacaatgcaagtgttggatgttattttgtcattt
actatacactataaaccaaaattaagaaaatcagcacaacatggaatatgtgccatatta
aacggaagtgatatcatgaaaagtgaaaacccaccgcaatatcatccagctactccatac
atcgcaaaattctgtattggtcaacttgattccaagtccgatggtattacaaatgttctc
catgtccttacactactaaaagacattttccatcatttaccaaagattcatgtgaagact
atcagtgaatctttattgaagcttatgactatgaaaaatgtgttagtaacttcatgttgt
ctacaaacctttcatggtttgttcgtttctcgaccatcagaagctattctaccagtacaa
agaaatgggcaaatcattactgccttatatgattaccaacctccagcaactgatacacaa
ccaactttagcgtggctaactgtaatgcaagaagcatatttgaatttagcccacaattca
ttaaatttatgtgcagttctgttaccaagaattttagacagatgcatgcaattgtggctt
tcggacaaatcagaagttatatctggttcttcgcacacgataaaaattttattacaagac
tgtgtcggtaaaatatgtgaaaccgaagaatcaatgaaaacatataaggacactatcaat
cagataacttctatgatccatcaagcattaggttatcagtatttggaagcttggtatcat
attcttcatttaatagccctactgtttcaggtaactggtaaagcgagaagtccgcaatta
atagagatattaaaaactctagctgagttacgtgattcttacaattttgcatcgaaaaat
gacgctgagtacgctattggagctgccataagagtactaggaccggagacaatattaaat
ttgattccattgaaggtatcggacaatgcgattaatttaaaaagaacttggctactacca
ttactgaaagattgcgtgctaggtggatcacttactttcttcatggaaatattactacct
atcgttgcattgtgcgaaaaaaaagcaaccgaacctgtaggcgggaaaacttacgaattt
ctcgtttgccaaatctgggctattttaccaagtatatgcaacaacgctactgatgtgaaa
gataatttcaagaatatagctagactgttaggaacaaatttaaatgagagaaagaattta
aggatgtcgataatgtctgccttacgaagattaataacgaaagcagtcgaagacgacaaa
aaagaagatatacacgaactagctagatttgcaaagaattatttaccattgtttttaaat
ctatacactactaagccacttggaactgacgaagaaggacaacgctttgctacatatgat
acaataagggtgtatcttacaattacggataaggaattggtacacgaattattcgatcgt
gcgttatttaagttgaaagaacctgatatcgacgattttttcaaagaaagtattcacgat
ataataagattatttattaattatactgacattaacagattaaagacgttttacgatatg
agtgtacctcttcttaaagaaatttctaaaaccaaggaacagaagaaagcatataggttt
ttagaagagatatgtggcagtgagaaggaaacatgtaaagagtttgtagttcaatacaga
cgggagatacaaaaattattaatatcctcagctactgaagtcgcaaaaccaagcagagga
gcacgattaagatgcttaattcatctgatcaaaattcatccacaacttgagaaaactaaa
ttcttagaagccattgtgcccgaagcggtaatctatttaaaagatttaaatacgaaatgt
cgaacttctgcatatcaacttttaaacactattgccgagaaatttctacaaaatcctaca
aatcttaaagaatatgttaatatgctcatggttggtttgagtggtgcgatagaaaatata
caaaagtattgtaccgcatccttgctggcactttcctctatcacttatcattacaacgga
tctttaggtatagagacagttaaagaaatcttgggacaagcttgtatttttgttacaagt
ccgacgagagaaattgcagaagccgcattggcatatatcaaagtctatattactgtgata
ccatctcatattgctgcttcgaatttaaaattgttgatagacggtttatgtgcaatgaac
gatgattgccataggcatttcagacaaaaagtacgagatattctagtaaagttaataaga
aaatatggaatggaaacaatttctggcatgattccagcttctaatgcgatgttacataag
agattgaaaaatatgaataaggcagaagaagcgaagaaaaagaaaaatgaattgaggaaa
ttgaaaaaacaagaaaatgacgaggatactgaattcagtgcaaagagaaaacctaaaagt
atggaagaaatattggcggatagcgatgatgagttcgatgaagatatggacaatgaagag
tcaaggaaaaagaagaaaagaacatcgcgaaaggaagcctggattcatgagaatgaagag
attgttgatctcgttgatcctgcggctgctcgaaatatatcaacaacgcaacctacagtc
gctataaattcaaaaatagcagctataaaacggaaagatcgtgaatttaagactacatct
gatggtcgtcttattatcacagtagataatgaaaaagataatgaaccagaacccaagaga
aagaagaaatctgcacttttgttgcacagtgattcagaagacgattatgaagatgatgtt
cagtctgtagctatgtcgcaagcaatggataaaaaacgtaaatatagcgatagttatgat
aacattagcgtaaggagtggatccacattgaagtatcaagcaggaggatctggaatacat
cgaccattgaaaaaatcaagaacggaatatataccaggagcagaatataaagcatcaaag
gctggaggtgatgttaaaaggaaaggaaaaccagatccatatgcttatgtacctctgtca
agagcagcattaaacaaaagaaaaaagaagaagaatgcgagtaaatttcaaaacattatt
aaaggagcaaagaaaggtgcgaaaattggaatgaagcaaaggaaaaactaa
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