Bombus affinis (rusty patched bumble bee): 126924111
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Entry
126924111 CDS
T09368
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
baff
Bombus affinis (rusty patched bumble bee)
Pathway
baff03020
RNA polymerase
baff03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
126924111
09124 Replication and repair
03420 Nucleotide excision repair
126924111
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
baff03021
]
126924111
03400 DNA repair and recombination proteins [BR:
baff03400
]
126924111
Enzymes [BR:
baff01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
126924111
Transcription machinery [BR:
baff03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
126924111
DNA repair and recombination proteins [BR:
baff03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
126924111
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
126924111
NCBI-ProteinID:
XP_050594192
LinkDB
All DBs
Position
14:complement(590513..595250)
Genome browser
AA seq
1175 aa
AA seq
DB search
MYSLEDDQYDDEDAEEISSKLWQEACWIVINAYFDEKGLVRQQLDSFDEFIEMSVQRIVE
DSPQIDLQAEAQHTSGEIENPVRHLLKFEQIYLSKPTHWEKDGAPSPMMPNEARLRNLTY
SAPLYVDITKTIVKDGEDPIETQHQKTFIGKIPIMLRSKYCLLAGLSDRDLTELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFSMKDGKYAYKSEIRSCLEHSSRPTSTLWINMM
AKSGASIKKSAIGQRIIAIIPYIKQEIPIMIVFRALGFVADRDILEHIIYDFDDPEMMEM
VKPSLDEAFVIQEQNVALNFIGTRGARPGVTKEKRIKYAREILQKEMLPHVGISDFCETK
KAYFLGYMVHRLLSASLGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRLYAQ
KFIDRGKDFNLELAIKTKIITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRVNSPIGRDGKLAKPRQLHNTLWGMLCPAETPEGAAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEIAPSAIADATKIFVNGCWVGIHRDPDQLMATLRKLRRQMDIIVSE
VSMIRDIRDREIRIYTDAGRISRPLLIVEGQTLLLKKRHIDMLKERDYNNDGWQELVGSG
VVEYIDTLEEETVMIAMSPEDLRQEKEYAYCTTYTHCEIHPAMILGVCASIIPFPDHNQS
PRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPHKPLVTTRSMEYLRFRELPAGINSI
VAILCYTGYNQEDSVILNASAVERGFFRSVFYRSYKDSESKRIGDQEEQFEKPTRQTCQG
MRNAIYDKLDDDGIIAPGIRVSGDDVVIGKTITLPEADDELDSTTKRFTKRDASTFLRNS
ETGIVDQVMLTLNSEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFSCE
GLTPDIIINPHAIPSRMTIGHLIECIQGKVSANKGEIGDATPFNDAVNVQKISTLLQEYG
YQLRGNEVMYNGHTGRKINAQVFLGPTYYQRLKHMVDDKIHSRARGPVQILVRQPMEGRA
RDGGLRFGEMERDCQISHGAAQFLRERLFEVSDPYRIHICNFCGLIAIANLRNNTFECKG
CKNKTQISQIRLPYAAKLLFQELMAMNIAPRLMVA
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgtattctctggaagatgatcaatacgatgatgaagatgcagaagaaatttcgtcaaaa
ctttggcaggaagcctgttggattgttattaatgcctattttgatgaaaaaggtcttgtg
agacaacaacttgacagttttgatgaatttattgaaatgtcagttcaaagaattgttgaa
gactcaccacaaattgatttacaagcagaagcacaacatacttcgggcgaaatagaaaat
ccagttagacacttattgaaatttgaacaaatttatttgtctaagcctacacattgggaa
aaagatggagctccatctcctatgatgcctaatgaggcaagactaagaaatttgacatat
tctgcaccactgtatgtagatataactaaaacaattgtaaaagatggagaagatcctatt
gaaactcaacatcaaaagacatttataggaaaaattccaattatgttaagatcaaaatat
tgtttacttgctggtttatctgatcgtgatttaacagaattgaatgaatgtccattagat
cctggaggctattttattattaatggttcagagaaagtactgattgcacaagaaaaaatg
gcaacaaatacagtttatgtatttagcatgaaagacggtaaatatgcatataaatcagaa
attcgatcttgtctggaacatagttcacgtcctacatctacattgtggattaatatgatg
gcaaagagtggagctagtattaaaaagtctgctataggtcaacgtattattgcaattatt
ccatatattaaacaagaaattcctattatgattgtattccgtgcacttggatttgtagct
gatcgcgatattttagaacatatcatatatgattttgatgatcctgaaatgatggaaatg
gtaaaaccttccttagatgaggcatttgtaatacaagaacaaaacgtggctctaaatttt
attggtactagaggtgcaagacctggagtaactaaagaaaagcgtattaaatatgctaga
gaaattttacaaaaggagatgcttccacatgtcggcataagtgatttttgtgaaaccaaa
aaggcttactttcttgggtacatggtgcaccgtttattatcagcctctttaggtcgaaga
gaattagacgatcgagatcattatggtaataaaagattagacctagctggtccattattg
gcattcttatttagagggttatttaaaaatttaatgaaagaagtgcgattgtatgcacag
aagttcatagataggggaaaagattttaaccttgaacttgccataaaaactaaaattatt
actgatggattaagatactcacttgctacaggaaattggggagatcaaaaaaaggctcat
caagctagagctggtgtatcacaagtattgaacaggttaacatttgcatcaacactatca
catttaagaagagtgaattctccaattggaagagatggaaaattggccaagccgcgtcaa
ttacataatacgttatggggtatgttatgtcctgcagaaacccctgaaggtgctgcagtt
ggtctagtaaaaaatttagcattgatggcttacattagcgttggatctcaaccttcacca
attcttgaattcttagaagaatggtccatggaaaatttagaagaaattgcaccaagtgca
atagctgatgcaacaaaaatattcgtaaatggttgttgggttggtattcacagagaccca
gatcaattaatggctactttacgtaaattaagaagacaaatggacattattgtatcagaa
gtatctatgataagagatattagagatcgtgaaatcagaatatatacagatgcaggaaga
atcagtaggcctttattaattgttgaaggacaaaccttactattaaagaaaagacatatt
gatatgttaaaagaaagagattacaataatgatggctggcaagaattagttggtagcgga
gttgttgaatatattgatactttagaagaggaaactgttatgattgcaatgtcccctgaa
gacttgagacaagaaaaggaatatgcatattgtacaacatatacacattgtgaaattcat
ccagcaatgattctgggagtgtgtgcctctattattccattccctgatcacaatcaaagt
ccaagaaatacttatcaaagtgctatgggtaaacaagctatgggagtatatattacaaac
tttcatgttcgaatggatactttggcacatgtactatattatcctcataaacctttagtg
actaccagatctatggaataccttagatttcgtgaacttccagctggaattaacagtata
gttgctatattatgttatactggttataatcaagaagacagtgtcattttaaatgctagt
gctgttgagagaggtttctttagatctgtattctatagatcctataaagattcagaatcc
aagagaattggagatcaagaagagcaatttgaaaaacctacacgccaaacttgtcaaggg
atgcgtaatgctatttatgataaattagatgatgatggaattattgctcctggaattcgc
gtatcaggagatgatgtagttataggtaaaactattactcttccagaagcagatgatgag
ttagatagtacaacaaaacgttttacaaaacgagatgcatcaacctttttacgtaatagt
gaaactggaatagtagatcaagtaatgttaactttgaacagtgaaggatataaattttgt
aaaatacgcgtacgcagcgttcgtattccacaaattggtgataaatttgcttctcggcat
ggacaaaaaggtacttgtggaattcaatacagacaagaagatatgccattttcatgtgaa
ggtctcacgccagacattataattaatcctcatgctatcccatcgcgtatgactattggt
cacttaattgagtgtatacagggtaaagtgtctgctaataaaggtgaaattggtgatgct
actccatttaacgacgctgtaaatgtacagaaaatttctacacttttacaagaatatggt
tatcaactgagaggaaatgaagtcatgtataatggtcatactggccgcaagataaatgcc
caagtctttttagggccaacttattatcaacgtttgaaacatatggtggatgataaaatt
catagtagagctcggggacctgtacaaattttagttagacaacctatggaaggaagagca
agagatggaggtttacgatttggtgaaatggaacgtgattgtcaaatttcccatggagct
gcacaatttctaagggaacgtttattcgaagtatcagatccatatcggatacatatatgt
aacttttgtggtttaatcgcaatagccaatttgaggaataatacatttgaatgcaaagga
tgtaaaaacaaaacacaaatttctcaaattaggctaccatatgcggcaaaattacttttc
caagaacttatggctatgaatattgctccccgattaatggtcgcataa
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integrated database retrieval system
