Bombus affinis (rusty patched bumble bee): 126924125
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Entry
126924125 CDS
T09368
Name
(RefSeq) WD40 repeat-containing protein SMU1
KO
K13111
WD40 repeat-containing protein SMU1
Organism
baff
Bombus affinis (rusty patched bumble bee)
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
baff03041
]
126924125
Spliceosome [BR:
baff03041
]
Complex B
Other components
Complex B specific factors
126924125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
EIF3I
WD40_Gbeta
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
LisH_TPL
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
NBCH_WD40
Beta-prop_ACSF4
Beta-prop_TEP1_C
Beta-prop_VPS8
Beta-prop_Nup120_160
Beta-prop_Aladin
Beta-prop_DCAF4
Ge1_WD40
Beta-prop_Vps41
Beta-prop_WDR41
WD40_MABP1-WDR62_1st
Beta-prop_NUP159_NUP214
Beta-prop_SPT8
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
Beta-prop_IFT122_1st
Beta-prop_EIPR1
Beta-prop_NWD2_C
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_SCAP
Beta-prop_DCAF12
Beta-prop_IP5PC_F
WD_LRWD1
PROPPIN
WD40_like
LisH_WDR26
VPS8_N
LisH_PAC1
DUF7165
Beta-prop_LRRK2
zf_topless
Motif
Other DBs
NCBI-GeneID:
126924125
NCBI-ProteinID:
XP_050594235
LinkDB
All DBs
Position
14:complement(563338..565810)
Genome browser
AA seq
510 aa
AA seq
DB search
MSIEIESADVIRLIQQYLKESNLVKTLQTLQEETGVSLNTVDSVDGFVADINNGHWDTVL
KAIQSLKLPDKKLIDLYEQVVLELIELRELGAARSLLRQTDPMIMMKQQEPERYIHLENL
LARSYFDPREAYPDGSTKEKRRAYIATALAGEVSVVPSSRLLALLGQALKWQQHQGLLPP
GTTIDLFRGKAAVRDQEDEKYPTQLSKQIKFGQKSHVECARFSPDGQYLVTGSVDGFIEV
WNFTTGKIRKDLKYQAQDNFMMMEQAVLSMAFSRDSEMLAGGGQDGKIKVWRVQSGQCLR
RFEKAHSKGVTCLQFSRDNSQILSASFDTTIRIHGLKSGKTLKEFRGHASFVNEVVFAPD
GHNVISASSDGTVKVWSLKTTECIGTYKSLGAADLTVNSIHVLPRNPEHFVVCNRSNTVV
IMNMQGQIVRSFSSGKREGGDFVCTVVSPRGEFIYCVGEDLVLYCFSTSSGKLERTLNIH
EKDVIGLTHHPHQNLLCSYSEDGLLKLWKP
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgtcaattgaaattgaatctgcagacgtaattcgtttgatacaacagtatcttaaagaa
tcaaatcttgtcaaaacattacaaacattacaggaagaaacaggtgtatcattgaataca
gtggatagtgtagatggttttgtagcagatataaataatggacattgggatacagtatta
aaagctatacaatcattaaaattgccagataagaaacttattgacttatacgaacaggtt
gtcttagaattaattgaattaagagaattaggagcagctcgatcattattgaggcaaaca
gatcccatgattatgatgaaacaacaagaacctgaaagatatatacatctagaaaattta
cttgctcgttcgtattttgatccacgtgaagcatatcctgatggaagtacaaaagaaaaa
cgaagagcttacatagctacagctcttgctggtgaagtatcagttgtaccatcaagtaga
ttacttgcattattgggacaagcattaaaatggcaacaacatcaaggtttacttccacct
ggtactacaattgacttgtttagaggaaaagcagcagtgagagatcaagaagatgagaag
taccctactcaactttcaaaacagattaagtttggtcaaaaatctcatgtagaatgtgca
cgtttttcaccagatggtcagtatttagttactggttctgttgatggatttattgaagta
tggaatttcacaactggtaaaatcaggaaagatttaaaatatcaagctcaagacaatttt
atgatgatggagcaagctgtattgtcaatggcttttagtcgtgatagtgaaatgttagct
ggtggtggacaggatggtaaaataaaagtgtggagagttcaaagtggacaatgtttaaga
agatttgaaaaagcacattcaaaaggtgttacatgccttcagttcagtagagataacagc
caaattttatctgcatcatttgatactactataaggatacatggacttaaatctggaaaa
actttaaaagaatttcgagggcatgcttcctttgtaaatgaagtagtttttgccccagat
ggacataacgtaataagtgcatcatcagatggaactgtaaaagtttggagtttaaaaaca
acagaatgtataggtacatataagtccctaggagctgcagatttaactgttaatagcata
catgtccttccacgaaatccagaacatttcgttgtgtgtaatcgttcaaacacagttgta
attatgaatatgcaagggcaaatagtaagatcattctccagtggaaaacgagaaggaggt
gacttcgtatgtactgttgtaagtccacgtggcgaatttatttactgtgttggtgaagat
cttgtgctttattgtttttctacatcatcaggaaagcttgaaagaacacttaatatacat
gagaaagatgttataggtttaacgcatcatccgcatcagaatcttttatgttcatatagc
gaagatggtcttttaaaattatggaaaccgtaa
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