Bombus affinis (rusty patched bumble bee): 126924526
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Entry
126924526 CDS
T09368
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
baff
Bombus affinis (rusty patched bumble bee)
Pathway
baff03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
126924526
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
baff03021
]
126924526
03036 Chromosome and associated proteins [BR:
baff03036
]
126924526
Transcription machinery [BR:
baff03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
126924526
Chromosome and associated proteins [BR:
baff03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
126924526
PBAF complex
126924526
GBAF(ncBAF) complex
126924526
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM
SWIRM-assoc_3
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
BRCT_2
Motif
Other DBs
NCBI-GeneID:
126924526
NCBI-ProteinID:
XP_050595075
LinkDB
All DBs
Position
14:complement(8720668..8726134)
Genome browser
AA seq
1019 aa
AA seq
DB search
MLALGPKKDGGPNTKFFESQEILTQLDGVKQWLLKNCKKYVQTDPPTNKSLATLIVQLLQ
FQEDNLGKNVSKPPMTRLPMKCFLDFKPGGGLCHILATAYRFKQEQGWRRFDFPVGKSGS
RMDRTVEMLMAAERALVQNRCMIIPSVYVRPDVDKSTAAKVKEAVRRHQGSIVENEADAT
HIIYPPVDPMEEEYARPCMRRERSVLLHWYYFPDSYDSWTALDLPWDFPEGTLTNTNMKS
IYKVSATWALDLDQYNEWMNEEDYEIDESGQKKIHKYRLSVEDLMAQPSHPPPSAKKPKR
KRSPSPSPKPGKRKSARGPSGVQSTSSSSSLTAPKKSRGGGEEEDDLTQGMEDPPAEPRI
VEVVATPTNPPVTGQGNIPTSGTTLATTGSKKQDNELQPLKSGNMADLDEPIEGDKGSSQ
STQDREERDASKERGEGNKGDEPEDNVTEQTHHIVVPSYSAWFDYNSIHTIEKRALSEFF
NGKNKSKTPEIYLAYRNFMIDTYRLNPTEYITSTACRRNLAGDVCAIMRVHAFLEQWGLI
NYQVDAESRPTPMGPPPTSHFHVLSDTPSGLAPVNPNPPKTPQPSAAKTLLDLEKKSSNL
GTEEKASAGVMANFGLKIDQYSRKPAVLKNKQAAGATRDWTEQETLLLLEGLELHKDDWN
KVCEHVGSRTQDECILHFLRLPIEDPYLEEGGPEGLGPLAYQPVPFSKAGNPVMSTVAFL
ASVVDPRVAASAAKAAMEEFAAIKDQVPAALLDQHLRNVQASANSDGKFDPAAGLAQSGI
AGTGPPEPPDDTTPPSTTGNVPATVATSPHSATAASMEMKKEEQEKPKESEIEQSQLDIS
KKEDELKETEEDTKSTMDAETMEAKEKKDKVVRDAQLQSAAAAALAAAAVKAKHLAAVEE
RKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQRQQLITERQQFHLEQLKA
AEFRARQQAHQRLAQEQQQQQQNQHPTWQPTAQQQQQQQPPSPQPPAQQPPPHTPPQQA
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atgctcgcgttaggacctaaaaaggacggtggacccaatacgaagttttttgagtcccaa
gaaattcttacacaactcgatggagttaaacaatggcttttgaaaaactgcaaaaagtac
gttcaaacggatcctcctactaataaaagcttagctacattgatagtacaattactgcaa
tttcaagaagataatttaggaaagaatgtttcaaaacctccaatgacaagacttcctatg
aaatgtttcttagattttaaacctggaggtggactatgtcatattcttgctacagcatat
cgttttaagcaagaacaaggatggcgtcgatttgacttccccgttggaaagtcaggatct
cgtatggacagaacagtggaaatgttaatggcagctgaacgagccttggtacaaaatcgt
tgtatgattataccaagtgtatatgttagacctgatgtagataaatcaactgctgcgaaa
gtaaaagaagcagttcgtcgacatcaaggtagtattgttgaaaatgaggcagatgcaacg
cacataatttaccccccggttgaccctatggaagaagagtatgcacggccttgcatgaga
cgagaaagatctgttcttcttcattggtattatttcccagatagttatgattcttggact
gcattggatcttccttgggattttccagaaggtacgcttacaaatacaaacatgaaatcg
atatacaaagtatcggcaacgtgggcgttagatttagatcaatataacgaatggatgaac
gaagaagactatgaaatagatgaaagtggtcaaaaaaaaatacataaataccgactttcg
gtagaagatttaatggctcagccatctcatcctccgccttcagcaaagaaaccaaaacgg
aaacgatctcctagtccatcaccgaaaccgggaaagcgtaaaagcgcaagagggccatca
ggtgtccagagtacttcgtcttcgtcgtcacttacggctccaaaaaaatcacgcggcggc
ggtgaagaggaagatgatctcacccaaggaatggaagatccaccggcggaacctcggatt
gtagaagtagttgcaactcctacaaatcctcctgtaactggtcaaggtaacattccaaca
agcggcactactttggctacaacaggcagtaaaaaacaagacaacgagcttcaaccgctc
aaatctggtaatatggcagacttggacgaacctatagaaggagataagggaagttctcaa
agtactcaagatagggaagaacgagacgcaagcaaagaaagaggagaaggaaataaagga
gacgaaccagaagataatgttactgaacaaacacatcatatagttgtccctagttactct
gcttggtttgattataattcgattcatactatagaaaagagagctttatctgagtttttt
aatggtaaaaataaatctaaaacaccggaaatttatcttgcatacagaaattttatgatt
gacacgtacagattaaatcctacagagtacattacatcgacagcttgtagacggaattta
gcaggcgatgtttgtgcaattatgcgtgtgcatgcatttttggaacaatggggacttatt
aactaccaggtagatgcagaatcaagaccgacacctatgggaccacctccgacatcacat
ttccatgtattatcagatactccatcaggtttagccccggttaatccaaatcctcctaag
acaccacagccttctgctgcgaagacattacttgatttagaaaaaaagtcatccaacttg
ggaacagaggagaaagcctcagccggagtgatggcaaattttggattaaaaatcgatcag
tattcgagaaaaccagcagttttgaaaaacaaacaagctgccggcgctactcgcgattgg
acagaacaagaaacgcttttactattagaaggactagaattacacaaagatgattggaac
aaagtttgcgaacatgtgggttcaagaacgcaggatgaatgtatcttacatttcttacga
cttccaatagaagatccatatttagaagaaggtggaccagaaggcttgggtccattagct
taccaaccagtaccattttctaaagctggcaatccagttatgagtactgtagcatttttg
gcttcggtcgttgatcccagagttgcagcaagtgcagctaaagctgctatggaagaattt
gcagccattaaggaccaagtaccagcagctttattagatcaacacttgaggaatgttcaa
gctagtgctaactctgatggtaaatttgatccagctgcaggattagcacaatcaggtata
gctgggacaggtccacccgaacccccggacgatacaacaccaccttcaactactggaaac
gttccagcaacagtggccacatctccacattcggcaacagcagcttctatggaaatgaaa
aaggaggaacaagaaaaacctaaagaatctgaaattgagcaaagtcaattagatataagt
aaaaaggaagatgaactaaaagaaaccgaagaagatacaaaatcaactatggatgctgaa
actatggaggcgaaagaaaagaaagacaaggtggtgcgagacgctcaactccagtctgca
gccgcagcagcgttagcggcagctgccgttaaagcgaagcatttggcagctgtagaagaa
cgcaaaattaaatctttagtagcgttgcttgttgagacacaaatgaaaaaattggaaatt
aaattacgccattttgaagagctggaaactacgatggaacgagaacgcgaaggtctcgaa
tatcaacgacaacaactcattacagaaagacaacagtttcatttagaacaattaaaagcc
gcagaattcagagctaggcaacaagcgcatcagcgtttagcccaagaacagcaacagcaa
caacaaaatcaacaccctacatggcaacctactgcacagcaacaacagcaacaacagcca
ccgagtccacaaccaccagctcaacaaccaccaccgcacacacctccgcaacaggcataa
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