Bombus affinis (rusty patched bumble bee): 126924837
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Entry
126924837 CDS
T09368
Name
(RefSeq) Fanconi anemia group J protein homolog isoform X1
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
baff
Bombus affinis (rusty patched bumble bee)
Pathway
baff03440
Homologous recombination
baff03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
126924837
03460 Fanconi anemia pathway
126924837
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
baff03400
]
126924837
Enzymes [BR:
baff01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
126924837
DNA repair and recombination proteins [BR:
baff03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
126924837
FA (Fanconi anemia) pathway
Downstream FA components
126924837
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
ResIII
DEAD
HBB
AAA_14
Motif
Other DBs
NCBI-GeneID:
126924837
NCBI-ProteinID:
XP_050595699
LinkDB
All DBs
Position
15:complement(6923262..7089643)
Genome browser
AA seq
976 aa
AA seq
DB search
MLVIYVISAVVVFITYTGVKLKLEEWFEETKMSRLRLKRDNSTYERSQVERLCPESPNNI
EISSDESDIVLTNEIIESEKDSSDPSIIDTSYDEETLSKFEKSTDSIKSDEDIKELTYNT
SSKSKTSMFNWNQQGPSPKKRNMHDHNDSDSSDDFNSKPTWFKKKHNEKKHKGSHIKQTK
IKNEPDDKQKEETVAQVNIQHEQMISGIKVKLPVKPYSCQVAVMNQLIQGCIKQENCLLE
SPTGSGKTLALLCGVLAWHDHHVAEVQNQKLEKQIQEDISRDCKSTASHENNGEDLAESS
NTKCTDYCEDYDEEEDFEDSYENSKKKKISKIFYGTRTHKQIEQVVRELRKTSYRHKKMT
ILSSREHTCIQETTKNKTELCNDLLDTQNHKGCPFYNESNKKIIATFRGAKSRGLDDIWD
IEDLVTIGKNEGLCPYFAARSLMEQADIIFCPYNYIVDPDIRESMQLDVAGHVIILDEAH
NIEDICREVASVSFREDHLTAVATECESLMKQRAADSEIYGTLQTYSLKLVNFLKTTVVD
KVGYNSDNLSSPYWTGAELLELFNMNGLNEAMYTSFLGACNAAIADSNRAKEERRIFQKV
LQPVISPTTKKLIEQLMFTIRMITSSEYMNDFRACITETTVKDFKYATENTWLSSKVCTQ
RVRTLKLLCMNPGVTFAPLARQARSIILASGTLSPTASFQSELGTSFAHVLNTGHVIPKE
QVYAICIPQGPNEVKLRANYQSVNSWAFQDELGAVLLDVCESVPHGILCFFSSYNVMHTQ
MQRWINNSIWTKITSVKQIFIEPRHGGDLKDIMYEYRQVIEQTSDKQRGKITGALFLAVF
RGKVAEGIDFKDNEARCVITVGIPYAVRKDPVIDMKLSYNDMNVKRGLLKGSEWYSIQAF
RALNQALGRCLRHINDWGAVLLVDERFLMHENKENLPKWVKTMWVNQNGYNLRENLKDFV
SKQKAREEKQLGITNS
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atgcttgtgatttatgtgattagtgcagtggtcgtgttcatcacctacacgggagtcaaa
ttaaaactagaagagtggtttgaagaaacaaaaatgagtagattacgtctgaaaagagat
aattcaacgtatgaaagatcccaggttgaaaggttatgtccagaaagcccaaataatatc
gagatatcttctgatgaaagtgatatcgtgctaactaatgaaataatagaaagtgaaaag
gattcttcagacccatcgataatagatacaagttatgacgaagagacactatctaaattt
gaaaaatctacagacagtataaaatcagatgaagatattaaagaacttacgtacaacacg
agttcaaaatccaagacttccatgtttaactggaaccaacaaggtccaagtccaaaaaaa
agaaacatgcacgatcacaatgattccgattcttctgatgatttcaactcaaaaccaaca
tggtttaaaaaaaaacataatgaaaagaaacacaaaggtagtcacattaaacaaaccaaa
ataaaaaatgaaccagacgataaacagaaagaagaaactgtggctcaagtgaatatacaa
cacgagcaaatgatatctggaattaaagtgaagcttcctgtgaagccttactcgtgtcag
gtggctgtaatgaatcagctcatacaaggttgtataaaacaggaaaattgccttctggag
agtccaacaggaagtgggaaaactttggctcttctttgtggtgtcctggcatggcatgat
catcatgttgccgaagtgcagaaccagaaactggaaaagcaaatccaggaggatatttca
cgggactgcaaatcaacggcgtcgcacgaaaacaatggagaagaccttgctgaaagctcg
aatacaaaatgtacggactattgcgaagactacgacgaggaggaagatttcgaggactcg
tatgaaaattcaaagaagaagaagatatcaaaaatattctacggtacgcgaacgcacaag
caaatcgaacaggttgtaagggaattaaggaaaacttcgtacaggcacaaaaaaatgact
attttgagcagtagagagcacacttgcatccaagagactacgaaaaataaaactgagctc
tgcaacgacctgttggacacccaaaatcacaaaggctgtccgttttacaacgaatctaac
aaaaagatcattgcaacgtttcgcggggcgaaaagtcgaggtttggacgatatatgggac
atcgaagacttggtaaccatcggaaaaaacgaaggactgtgcccatattttgccgccaga
agtttgatggaacaggcggacattattttctgcccttataactacatcgtcgatcccgat
attcgtgaaagcatgcaactcgatgtggccggccatgtgattattttggacgaagctcat
aatatagaagacatctgcagagaagttgcaagcgttagttttcgcgaggatcaccttaca
gccgttgcgactgaatgtgaatctcttatgaaacaaagagctgcagattccgagatttat
ggaactcttcaaacgtattccctcaagctggtgaattttctgaaaaccacggtcgtcgat
aaagtcggctacaacagcgataatctttcaagtccgtactggaccggtgcagagctgtta
gaattatttaacatgaacggtttaaacgaagccatgtatactagtttcctgggagcgtgc
aacgcagcaattgcagattcgaatagagcgaaagaggagaggagaatatttcagaaagtg
ctacagccggtcatttcacccaccaccaagaaattaattgaacaactaatgttcactata
cggatgatcacttctagcgaatacatgaacgactttagggcctgtataacagaaaccaca
gtaaaggatttcaaatacgccactgagaatacatggttgtcttcgaaagtgtgtacacag
cgtgtacgaaccttgaaactactgtgcatgaatccgggtgtgacctttgcaccgcttgct
cgacaagcgcgctctataatcctcgcgtccggtactctgagtccgactgcgtcgttccaa
agcgaattgggaacgtcatttgcacacgtgctcaacaccggccacgtgatacccaaggaa
caagtttacgcaatctgcatacctcaaggaccgaatgaagttaaactgagggcgaattat
caatctgtgaacagctgggcttttcaagatgaactaggtgctgtattgttggatgtttgt
gaatcagtgccacatggaatcctttgcttcttctcatcctataatgtgatgcacacacaa
atgcagaggtggataaataattccatttggacgaaaatcaccagtgtgaagcaaatcttt
atagaaccacgccatggtggtgatcttaaagatatcatgtatgaatatcgtcaagtgata
gagcaaacatctgataaacaaagaggaaaaatcactggagctttatttctggctgtcttc
agaggaaaagtagcagaaggaattgatttcaaggataatgaagcacgttgtgtcattact
gttggaataccatatgcagtaaggaaagatcctgtgattgatatgaaattgagttataat
gatatgaacgttaagagaggattattgaagggttcagagtggtacagtatacaggctttt
agggcattgaatcaagctttaggtcgttgcttgagacatataaacgattggggagctgta
ttgctagtcgatgaaaggtttctgatgcatgaaaataaggaaaatctcccaaaatgggtc
aaaacgatgtgggttaaccaaaatggatataacttgagagagaatcttaaagactttgta
tcaaaacaaaaggcaagagaagaaaaacaattaggaattacgaacagttaa
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