Bombus affinis (rusty patched bumble bee): 126924903
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Entry
126924903 CDS
T09368
Name
(RefSeq) structural maintenance of chromosomes protein 3 isoform X1
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
baff
Bombus affinis (rusty patched bumble bee)
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
baff03036
]
126924903
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
baff00535
]
126924903
Chromosome and associated proteins [BR:
baff03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
126924903
Meiosis-specific proteins
Cohesin complex and associated proteins
126924903
Proteoglycans [BR:
baff00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
126924903
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_29
AAA_15
Motif
Other DBs
NCBI-GeneID:
126924903
NCBI-ProteinID:
XP_050595841
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All DBs
Position
2:complement(12297122..12303822)
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AA seq
1213 aa
AA seq
DB search
MNILCDYTVRLIPSENVIIQGFKSYREQTVVEPFDPRHNVVVGRNGSGKSNFFYAIQFVL
SDEFSHLRPEQRQALLHEGTGPRVISAHVEIIFDNSDGRLPIDKEEVYLRRVIGSKKDQY
FLNKRIVTRNDVMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYD
DRREESKFILKETEGKLEKIQDFLRTIEERLKTLEEEKEELKEYQCWDKQRRCLEYTIHE
RELKENKRKLEDLEKSRANSGAEQARLCAEAKTAQEMVRAATKRLKEAKKEVQTAKEERD
TLSAEQQQLLKEKTKLTLTINDLLEEVKGDNDSRKRAQQELEKLKVNIAAREAELEELKP
EYEEMKRVEEECTRELQLKEQKRKELYAKQGRGSQFTSRDERDKWIQNELKQLTKQIKDK
EEHERKISEDLKRDAEKQITLEKKIEEHTREMEQQRTSIDEHNKQYYELTKAKDQCQATR
KEQYRQESVLQLNLSGLKEDLAKADQSLRSMAGKPILNGRDSVRKVLDTFRTRKDMAHEV
SSYYGPVIENFSCDKSVYMAVEVTAGNRLFHHIVETDKFGTKILKEMNNQRLPGEVTFMP
LNRLHVKDIDYPETGDAIPMISQLNYDQKYDKAMRYIFGKTLICRNLEAATNLARTSGLD
CVTLEGDQVSSKGSLTGGYFNTLRSRLEIQKTRSELIAQISSLESQFSTLKEEIRKADQN
ISSYVSEMQRTETKNSKAKDVYDKMKAEIRLMKEELSAIERYRTPKERSLAQCTSSLEAM
RATKEGLESELHQELMAQLSVADQRQVDTLNDDIRRLTKDNKEAFAKRMRLEAEKNKLEN
LLTNNLVRRKDELVQALQEISVEDRQRQLESSKAQLGDIEKRLVKVNADFKAQNERVTNA
IKKQKAESAEVEKWKAREKEAQEKIEADAKDLEKLASKLNILQQKIVECTQKITELGALP
SQEVYSKFSTLTTKQLFKEMEKANNHLKKYSHVNKKALDQFMSFSDQKEKLVKRKEELDR
GDEKIKELMSVLEQRKCEAIQFTFKQVSKYFSEVFKKLVPSGHAQLVMKTADGDEGDDTT
TEAADSDRFIGVGIRVSFTGHRAEMREMNQLSGGQKSLVALALIFAIQKCDPAPFYLFDE
IDQALDAQHRKAVADMIHELSSDAQFITTTFRPELLQHANKFYGVKFRNKVSHVVCVTRE
EAADFVEDDTTHG
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgaatatattatgcgattacacagttagattaataccttcagaaaatgtgattatacaa
ggtttcaagtcatatcgtgaacaaacagtggtagaaccctttgatccaaggcacaatgta
gtagttggaagaaatggttctggcaagagcaattttttttatgcaatccaatttgttttg
agtgatgaattttctcatctcagacctgaacagagacaagctttattgcacgagggcaca
ggaccaagagttatttctgcacatgtggaaattatatttgataattctgatgggagatta
ccgattgataaagaagaagtatatttaagaagagtaattggctcaaagaaggatcagtat
tttcttaataaaagaatagtaacaaggaatgatgtgatgaatttgttagaatcagcagga
ttttcaagatcgaatccatattatattgtaaaacaaggaaagattaatcaaatggcaaca
gcacctgattctcaaagacttaaattattaagggaagtagctggtactagagtatatgat
gacaggagagaagaatcaaaatttattttaaaagaaactgaagggaaactagaaaaaatt
caagattttttaagaactatagaggaacgtttaaaaacgttagaagaagaaaaagaggaa
cttaaagaatatcaatgttgggataaacagcgtcgatgtctagaatatacgattcacgaa
cgagagctcaaagagaataaaagaaagttagaagatctggaaaagtctagagctaatagt
ggggctgaacaagccagattatgtgcagaagcaaaaactgcacaggaaatggtgagagca
gcaacaaagcgccttaaggaagcaaagaaagaagtgcaaactgcaaaagaagaacgggat
acactaagtgctgaacaacaacaattattaaaagagaaaactaagttaacattaactatt
aatgatttattggaagaagtaaaaggagataatgatagtcgaaaacgtgctcaacaagaa
ttagaaaaattaaaagtaaacattgcagcaagagaagcagaattagaagaactaaaaccg
gaatatgaagagatgaaacgtgttgaagaggaatgtacacgtgaattgcaattaaaagag
caaaaacggaaagaattatatgccaagcagggtcgtggcagtcaatttactagcagggat
gaaagagataaatggatacaaaatgagcttaaacaacttaccaaacaaattaaagataag
gaagaacatgaaagaaaaatcagcgaagatttaaaacgagatgcagaaaaacaaattact
ttagaaaaaaagatcgaagaacatacacgcgaaatggaacagcaacgaacttcgatagac
gagcacaataaacaatattacgaacttaccaaagcaaaggatcagtgtcaagctactcga
aaagaacaatatcgacaagagagtgtattacaactcaatttatctggactaaaagaagat
ttggccaaggcagatcaaagcttacgatctatggcagggaaacctattttaaatggtcga
gatagcgtacgaaaagtgttggatacatttcgaactcgtaaagatatggcccatgaggta
agtagttattatgggcctgtgattgaaaattttagttgcgacaagagtgtttatatggct
gtagaagtgactgcaggaaatcgtttatttcatcatattgtcgaaactgacaaatttgga
acaaaaattttaaaagaaatgaataatcagcgtcttccgggggaagtaacatttatgcct
ttaaatcgactccatgtaaaagacatagattatccagaaaccggtgatgccatacctatg
atatcacagttaaattacgatcagaagtatgataaagctatgaggtatatatttggaaaa
acattaatctgtcgtaatttagaagctgctacaaatttggctcgtacctcgggtttggat
tgtgtgactcttgaaggtgatcaagtatcctcaaaagggtctttaacgggcggatatttt
aatacactaagatcccgattagaaatacagaaaactagatcggaattaatagctcaaatt
tcatctctcgaatctcagttttctactcttaaagaagaaatcagaaaagcggaccaaaat
atcagttcttatgttagtgaaatgcaaaggactgaaactaaaaatagtaaagctaaagac
gtatacgataaaatgaaagcagaaatacgacttatgaaggaagagttaagtgcaatagaa
agataccgcacaccgaaagaaaggagtctagcgcagtgtacatcgagtttagaagcaatg
cgtgcaacgaaagaaggtttggaaagtgaattacatcaagaactcatggcacaattgtct
gttgctgatcaacgtcaagttgatacgttaaacgatgacataaggcgcttaacaaaagat
aacaaagaagcatttgctaagcgaatgcgattagaagctgagaaaaataaattggaaaat
ctgttaaccaataatttggttagaagaaaagacgaattggttcaggcattgcaagagata
tcagtagaggatcgacaacgtcaattagaatcatcaaaagcacaactaggggatattgaa
aaaagattagtgaaagtaaatgcagattttaaagctcagaatgaaagagtaactaatgct
ataaagaagcaaaaagcggaatctgcagaggtcgaaaagtggaaagccagggagaaggaa
gcacaggaaaaaatagaagcagatgctaaggatctagagaaactagccagcaaattgaac
attttacaacagaaaatagtagaatgtacacaaaaaattaccgaacttggtgcattacct
agtcaagaagtatattccaaatttagtactctgactactaaacagttatttaaggaaatg
gaaaaagcaaataatcatttaaagaaatacagtcatgtaaataaaaaagcattagatcaa
ttcatgtcatttagtgatcagaaagagaaattggtaaaaagaaaagaagaattagataga
ggtgatgaaaaaattaaagagctaatgtcagtacttgagcaacgtaaatgcgaagcaatt
caatttacattcaaacaagtaagtaaatattttagcgaagtgttcaaaaagcttgtacca
tcgggtcatgctcagttagttatgaaaacagcagatggtgacgaaggagacgatacgaca
acagaagcagctgattctgatagatttattggtgttggcatacgagtatctttcactggt
catagagctgaaatgagagaaatgaatcaattgtctggaggacaaaaatcacttgtagca
ttagcattgatatttgctatccaaaaatgtgatccagcgccattttacttatttgatgaa
attgaccaagcgctagatgcacagcacagaaaagctgtagcggatatgatccatgaactt
agttccgatgcacaatttatcacaacaaccttcagaccagaattgctgcaacacgcgaac
aaattttatggcgtcaaatttagaaataaagtttctcacgttgtatgtgtaacacgagaa
gaagcagcagattttgtagaagacgatacaactcacggttaa
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