Bombus affinis (rusty patched bumble bee): 126924919
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Entry
126924919 CDS
T09368
Name
(RefSeq) huntingtin isoform X1
KO
K04533
huntingtin
Organism
baff
Bombus affinis (rusty patched bumble bee)
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
baff03019
]
126924919
04131 Membrane trafficking [BR:
baff04131
]
126924919
03029 Mitochondrial biogenesis [BR:
baff03029
]
126924919
Messenger RNA biogenesis [BR:
baff03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
126924919
Membrane trafficking [BR:
baff04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
126924919
Mitochondrial biogenesis [BR:
baff03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
126924919
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Htt_N-HEAT
Htt_C-HEAT
Htt_bridge
Htt_N-HEAT_1
HEAT
Vac14_Fab1_bd
TOR1L1_N
HEAT_EF3_N
Rota_NS26
Motif
Other DBs
NCBI-GeneID:
126924919
NCBI-ProteinID:
XP_050595866
LinkDB
All DBs
Position
15:3594701..3604994
Genome browser
AA seq
2889 aa
AA seq
DB search
MTTLNNVLKAIEALKSAQESNTLLSDSNARKDKLTCCMTITEGICSPTVKLATKFPQVLS
LSIETLLTLCNDDESDVRTVADETLNKIIRAMADSNIVKVQIELYNEIKRNGPARTLRAA
LWRFGLLSHMIRPTRGKAYVSNLIPCIVNIAHRSEESVIETLSQSLPLIMKALGPFMTDN
DIKTLLKAFFENISCVQAAFRRAAANMILATCLNCRRPQFFLNYVLKHLLGIIVPISEDE
NRIAAIIGIFGCIRIILPHICNPSEDPDDDTVETDSLLQIYELCLHYTKWHSDHNVINAV
LETLTQFLKSPPKVLISLLLSNQGITQSKIAVNQNEMMLSLSQASTSSVATACGENSDYT
LNLLDSDIPEINPKIEKWMLDSETIPPLMENVQISKECINNIVEMKGKILENYSDLKIGV
IDNETIEEGSDVGSEIEKSEKVYSSLQNEPRDVDYTEEITCSIASLKKLSLDFSLREIDV
GTFTDPDIPLKFCCRYLVSSFLLTGNIGHVIPDKYFRVSVKSLALTCVAYILKLCPNLFL
IPVAKEPNSNENKQMITDILLFASHPDPQIRGNISIIIGTFLKSVYTQYGGSFKKFEAEI
TDKNLCGIISLDNLIKLLLKGLEDDSATTCRQTLTAFSLCLPELLESVDNKYGITVLTVL
PQLVKNPYFLVKVKLVELLSEISYVTIEHITGGSMFQEHFINVIVTLLGDQDQRIRHAAS
DAIVKSIPLLHFQQPHDDVITRKAIQYTEQYMSAVTRSSVELSSCQEKQKFFINTSIQPF
AALNFHNSTNYRPNVEYSLSIVINMLAEILGVQSSKYLVYGCCEALFRLSDVYNTTVYIR
GWDCISPKTLLKRSHKKNGSRLDISESNFTSEMMPSSVSNSLLSLALPLLSSSPISLDLL
THKHLVLLAGNLASGLAFCNFKPNDPTKTWWGTFKDKQIELLLTHITRVLNIFVHIIDDV
QLTQSSTKTALSSLSSTQTLSPKKKIIMSEPKLKEKGEKFGSLKFIKEQMGAFVSTPHYM
KMYENLKAAHLNYLATLEPHASEMYLSLLNAILDVLSQILEIISVNEAAQIAEEILHYLQ
STVVLSPTATVQCVQQLLKCLFSTNVYAQWNELDIQKNSDRITVLWDDVKGFYNHCFQSP
ARQMANTIKSMGNNCRGENEPDTGWVGLLHRKGDRKFSSIFKNLSRSSDQKTSVASFIRL
FEPMVIKSLKQYTVTSSVSLQCQVLMLLSQLVQLRVNYCLLDSERIFIGFVLKQFEFIEE
GHVKQTEDLLPKIFNFLVHLSYEKNHSKAIIGIPKIIQLCDGLMASGQPALTHCIPALAP
VVEDVFLIRNASSNPTEQRELETTREVLISMLLRLVEYYQIIELLALCLTESRFSGDGNG
EEKWRRWSRLTMDSVLPMLAAGKVRIESEKAHVALIKLFAAISPTVFRPVDPLLKVLLVK
PDSLDTSNLRLKRWLGVVNVVLLSLIACSKEEAMLARLSDLSSNVSELSHSFLHPKSSSQ
TMDPLNVLDSQSAEVPPERILARFIFKVINLVGCKVYNLLGLVDHKLSDPYIAFSESMEN
DYYLIHQFAFFLQLCIHMFESGSHCKVANAVIQMIQGRNVLEEEKLPISDLNYLMLNIGN
KCPTLTCQWAYLMTLLGYNEMTFWSKILGTRRTEYVVHCSPNEEKNVDHDSSVNIQIIRK
GGIILFCDYVCENLCDAEPLTWLLVNHTEETVNSAIESPVRDLLTTAIHRNSAASGLLVQ
AIATKCTDLSQPSFVKRLLECIEGAHHSQSGAVLMTLIPRLLSTKYLALSRMAAKIASRR
VEILLTTPAADATKQLSKEDFTKIMEILQVTKLAKKHGGLVSLLNKFGVQYYDLSPLELD
QCRPFNPSTVKSIQLDRNWFLSQVKLRCCSSSASHNLSEAAQLLRVLDFEDCLGILSSKE
FNISILKPCIILGVRISVEKCQKLEFGVAQNEKDFNFETSPLYSAAKQSLLEHVHYVTDL
MPKPHHIYNPTQSNGNSRELKYAHRFHELLNEFVYWDVLFMLIPAVKIYMKTLPKLAKYN
LAKIDKKSEEDLAKFAILCLELTHWMVHCDENKIKKLRPRNMELALSCASEILKHPGPSK
IFGENVKYSWVCSGAASLKKIVEYLLTTVDVLPVIDIRALEPALEDEDTRDFARACMRMA
DLVAWLEQCQKKQLSTNIPRYLFDTIQDLIVSISRQPLVNSYILTPPLVWKQNWNVVGSG
PTKCYFPLLSSESNLLQEVEILEQFIYRINLLGWVSRLQFEEIWMALLGVLNLSQNENVP
VEDIPALIQASSLAVQAITKLLLNTLLLPYPGNPRASTVIHYPRDPQLSVHKISSQKLYA
IQDLLTWKYECMNDSEMIDGLNMDHIFHRGNIERVANLNKYTYSQLSVSYLWSLCNLYED
KLSASVLNLKNRRNDALMSASLDLDSCLRFLIELYTSWMSPQANTPIQLLTEVVKSILAI
SELFVERAQYQWMLDMCLELSRIHPTENVILHQYLVVSVCKAAAVLTPLDFETLDKVKRL
VDTNLKSSFLPAKVSALHGSLYLLQSAVLANCEETMNIIHPLAIEYIQKHLDAQDLNGVL
RQSEEHQGVMWALVFFLLEHAEDTPPDTEAPAVLELVLNLLTSQNISCSLHQTLLQGLER
LVATKSVIGKVAEQIVKVAIDRLKQPSPMLSLPALQLLLTCMYTEAADRLNQPETEEPLP
DAEPEALVRSIERASAIFDKIRRGHSMEVELLCTVLSGVLGDFFPPSEILTKVIGEFLSP
QQPHPRLLAAVVFKVCERACTCAQMELLQDWVVFSLPNFIQSLPVTMSTWCLSCFFISAS
TNHWLRALFPYIQSRIGKYEYEDKKILCIAASDFYRKLSKDTQREAFVETFEAAAKEPGT
PFSDILASF
NT seq
8670 nt
NT seq
+upstream
nt +downstream
nt
atgacaacattaaataacgtgttaaaagctatagaagctttaaaatcagctcaagagtca
aacactcttctgtcagattcgaacgcaaggaaagataaattaacatgttgcatgacaata
acagaaggaatatgttcaccaactgtcaaactagcaaccaagtttcctcaggtacttagt
ctttcaattgaaactttactgacactgtgtaatgatgatgaatctgatgtcagaacggta
gcagatgaaacattaaataaaattataagggcaatggctgatagtaatattgttaaagtt
caaatagaactttacaacgaaataaaaaggaatggacctgctagaacattgagagctgct
ctttggagatttggtcttcttagtcatatgatacgccctacaagaggaaaagcatatgta
tctaatttgataccatgtatagtaaatattgcacatcgttctgaagaatctgtaattgaa
acgctatcacaatcattaccattaattatgaaagcactagggccatttatgacagacaat
gatatcaagacattattgaaagcattctttgaaaatatatcctgtgtacaagcagcattt
cgtagagctgcagcaaatatgattttagcaacatgtttgaattgtcgcagaccacagttt
tttttaaattatgtactgaagcatcttttaggtattatagtgcctataagtgaagatgag
aaccgtatagcagctattattggtatatttggttgtataagaataattttaccacatata
tgcaatccatcagaagatccagatgatgacacagtagagacagatagcttgttacaaatt
tatgaactatgtttacattatacaaaatggcattctgatcataatgttataaatgctgtt
ctggagacactgactcagtttttgaagtcacctccaaaagttctaatatcattattatta
tcaaatcaaggtataacacagagcaaaatagcagtgaatcaaaatgaaatgatgttatca
ttaagtcaagcaagcacatctagtgttgcaactgcttgtggagaaaattctgattatacc
ttaaatttacttgattccgatatacctgaaataaatccaaagatagaaaagtggatgcta
gattctgagactatacctcctttgatggaaaatgtacaaatttcaaaggaatgcataaat
aatattgtagaaatgaaaggaaagattttagaaaattatagtgatttgaagattggagtc
attgacaatgaaacgatcgaagaaggtagtgatgttggaagtgaaatagaaaaatcggag
aaagtttattcgagtttacaaaacgaaccaagagacgtggattataccgaagaaatcaca
tgttctatcgcatctcttaaaaaattatctttagatttttcgttacgagaaatagacgtc
ggaacttttacagatcctgatataccgttaaaattctgttgtcgttatttggtatcgtct
tttctcttaactggcaacattggtcatgtaataccagataaatattttcgtgttagtgta
aagtctcttgctttaacttgcgtggcttatattttgaaactttgtccgaatctattttta
atacctgttgccaaagaaccgaattctaacgagaataaacaaatgataacggatatctta
ttatttgcaagtcatccagatcctcaaattaggggtaatatatcaattattattggtaca
ttcctgaaatctgtatatactcaatatggaggttcttttaaaaaatttgaagcagagatc
actgataaaaacttatgtggaattatatcactagacaatttaattaaattacttttaaag
ggtttagaagatgactctgctaccacatgtcgacaaacattaacagcattcagtttatgt
ctaccagagttgttagagtctgttgacaataaatatggaatcactgtgttaactgtatta
cctcagctagtaaagaatccatattttctggtaaaagttaaattagtggaattattgagt
gagatatcgtatgttactatagaacatataactggtggatcaatgttccaagaacatttt
atcaatgttattgtaactctgttaggtgaccaagatcaaagaattaggcatgcagcatca
gatgctattgtaaagagtattcctttattacatttccaacaaccacatgatgatgttatt
acgcgaaaggccatacaatacacggagcaatatatgagcgcagttacccggagttcagta
gaactgtcctcttgtcaagagaaacaaaagttctttataaatacgtctatacagccattt
gcagctttaaacttccataactcgacgaattatcgtccaaatgtagaatactcgttgtcg
attgtaatcaacatgttggctgagattcttggagtacagtcatcgaagtatttagtgtat
ggctgttgtgaagcactgtttcgtttaagcgatgtatataatactacagtatatattaga
ggatgggattgtatttcacctaaaacattgttgaaaaggtctcataaaaagaacggtagt
cgattagatattagcgaatcaaattttacaagcgaaatgatgccatcgtccgtgagcaac
agccttttatctttggctttacccttactatcatcgtcccctataagcttagacttgtta
acgcataaacatttggtacttcttgctggcaatcttgcatcgggtttagcattttgcaat
tttaaacccaatgatccaactaaaacttggtggggcacgtttaaggataaacaaatagag
ttgttgttaacacatattacaagagtattaaatatatttgttcatataatcgacgacgtg
caattgacacaatctagtacaaaaacggcgttatcgtctttgtcatctacgcaaacatta
tcgccgaaaaagaagataataatgtctgaaccgaagttgaaagagaaaggagaaaaattt
ggaagcttgaaatttataaaagagcaaatgggtgcgtttgtttcaacaccgcattatatg
aaaatgtacgaaaatcttaaagcagcacatttgaattatctagccacgcttgaaccgcat
gctagcgaaatgtatttgtctttgttaaatgctattctagatgttctttcgcaaattctt
gaaattatatcagtcaatgaagcagctcaaatagcagaagaaattctacattatctacaa
agcactgtcgtattatctcccactgcaaccgttcagtgtgttcaacaattgctgaagtgt
ttattcagcacaaacgtgtatgcacaatggaatgaattagatatacagaaaaattcagac
agaataaccgtactatgggatgacgttaaaggattttataatcattgctttcaaagtcct
gcaaggcaaatggcaaatactataaaatccatgggaaacaattgcaggggtgaaaacgaa
ccagataccggatgggtaggtttgttacatagaaaaggtgatagaaaattctcttctatt
tttaagaatttatcgcgatcatctgatcaaaaaacctctgtagcttcgttcattcgtctt
tttgagccaatggttataaaatcattaaaacagtacactgtaacaagtagcgtgtcatta
cagtgtcaagtattgatgctactcagccagctagtgcaattaagagtcaactattgcttg
ttggattctgaaagaatattcattggatttgtattgaagcagtttgaatttattgaagaa
ggtcacgtgaaacaaacggaggatctattgccaaagattttcaactttttagttcatttg
tcgtacgaaaaaaatcattcgaaagctataataggaattccaaagataatccaattatgc
gatggacttatggcaagtggtcaaccagcgctcacgcactgtataccagccctggctcca
gtcgtagaagatgtatttttaattagaaacgcaagttcaaacccgacagagcaaagagag
cttgagacaacaagagaagtcctaatttcgatgcttttacgtcttgtagaatattaccaa
atcattgagctcttggcattatgtttaacggagtctagattcagcggagatggtaacgga
gaagaaaaatggcgaagatggtctagactgacaatggactctgttcttcctatgctggca
gcaggaaaagttcgaatagaatcggagaaagcacacgtggctttgattaaattattcgca
gctatttctcctacggtttttagaccagtcgatcctcttttaaaggtacttctcgttaaa
ccagactctctggatacttcaaatttgagactaaaacgatggttaggagtggtaaatgtt
gtcctgttatctttgatcgcgtgctcgaaagaggaagcaatgcttgcgcgactttccgac
ctcagttcgaacgtgtccgaactatcccactcgtttcttcatccaaaatcgtcttctcaa
accatggatcctttgaatgttttggacagccaatcagctgaagtaccgccagaaagaata
ttagctagatttatatttaaagttattaacttggtaggctgcaaggtttacaatctcctt
ggattggtcgatcataaactcagcgatccatatatcgcattttccgaatcaatggagaac
gattattatttgatccaccaatttgcattcttcttgcagttatgcattcacatgttcgaa
tctgggagtcactgcaaagtggcaaacgctgttatacaaatgattcaaggtcgaaatgtt
ctcgaagaggagaagctgccgatctccgatttgaactatttaatgttgaacattggaaac
aagtgcccaacattaacttgccagtgggcctatttaatgactttattagggtacaatgaa
atgactttttggtccaaaatattgggtactcgtcgaacagaatacgtcgtgcattgttct
ccaaatgaagagaaaaacgttgatcatgacagcagcgttaacattcaaattattagaaaa
ggtggcataatattattctgcgattacgtctgcgagaatctgtgcgatgcagagccctta
acatggttgttagttaatcatacagaagagacagtaaatagtgccatcgagtctcctgtc
agagatctcttgacgacagctatacacagaaattctgcagctagtggattgttggtacaa
gcgatcgcgaccaaatgcacagacttgtcacaacccagtttcgtcaagagactcttggaa
tgtatagaaggtgctcatcattcgcaaagcggagctgttttaatgacactgataccgaga
ttgttatccaccaagtatctggctttgtcgagaatggcggcgaaaatagctagtcgaaga
gtagaaattttattaaccacacctgcagctgatgcgacgaagcaattatcaaaagaagat
ttcaccaagatcatggagattctgcaagtgaccaagcttgctaagaaacacggtggatta
gttagtctgttgaataaatttggagtacagtattacgatttgtcccctctagaactcgac
caatgtagaccgtttaatccatccaccgtgaaaagtattcaactggatcgtaattggttt
ttgtctcaagtaaaattacgatgttgtagttcaagtgctagtcacaatttatcggaagca
gcgcagttacttagggttttagatttcgaagattgcctcggtatcctgtcttccaaagag
tttaatatctcgatattgaaaccctgcataatattgggtgtacgaattagcgtggagaag
tgccaaaaattagaattcggtgtagcacagaacgaaaaggattttaatttcgaaactagt
cccttatacagcgccgcgaaacagagtttattagagcacgttcattatgtcaccgattta
atgccaaaaccgcatcatatttacaatccaacgcaatctaatggcaattcgagagaattg
aagtatgcgcatcgttttcatgaactcttaaacgagtttgtatattgggatgtacttttt
atgttgatacccgctgtgaagatatatatgaagacattgccaaagttagccaagtataat
ctagcgaaaatcgataaaaaatccgaagaagatctagccaaatttgcaatactgtgttta
gaattaacacactggatggtacactgtgatgagaataaaattaaaaaattgagaccaagg
aacatggaacttgcgttaagctgtgcatcagaaattctaaaacatcctggcccaagtaaa
atttttggggaaaacgtgaagtattcgtgggtttgtagtggtgctgcttcactcaagaaa
atagtagaatacctgttgactactgtggacgttttgccagttatagatatacgtgcttta
gaaccagcgctagaagatgaggataccagagactttgctcgtgcttgcatgcgaatggct
gatctggtcgcttggttggaacaatgtcaaaagaaacagttatccacaaatattccacgc
tacctgtttgacacgatacaagatttaatcgtaagtatcagtcgtcaaccactggtaaat
tcatatatcttaacaccaccgttagtttggaaacaaaactggaatgtcgttggttctggt
ccgaccaaatgttacttcccgttattatcttcggagtcgaatctccttcaggaggtggaa
attttggagcagttcatttacaggataaatctgttaggctgggtctctcggttgcaattc
gaagagatatggatggctctcttaggggtgctcaatctttcacaaaacgagaacgtaccc
gtagaagatatcccagcgttgattcaagcgagcagtttagctgtacaggcgattacaaaa
ttgttactgaatactttgcttcttccttatcctggcaacccaagagccagcactgtgatt
cattatccgagagatcctcagctctcggttcataaaatcagttctcaaaaattgtacgcg
attcaagatctgctcacgtggaagtacgaatgcatgaacgactcagagatgatcgatggc
ttgaacatggatcacatcttccatcgaggaaacatagaaagagttgcgaatttgaacaag
tatacatatagccaactttctgtttcttacttgtggtcgctgtgcaacttgtatgaggat
aagttgagcgcctccgtcctcaatttgaagaacagaagaaacgacgcgttaatgtccgcg
tcacttgatttggattcctgccttcgtttcttgatagaactttatacatcttggatgtct
ccgcaggctaatacaccgatacaattgctcacggaggtcgttaagtctattctagcaatt
tcggaattgttcgtcgaaagagcccagtatcagtggatgttggacatgtgtctggaattg
tcgagaattcatccaacagagaatgtcattttacatcaatacttggtagtttccgtgtgt
aaagctgcagcagtactaacaccgttggactttgaaacgttagacaaagttaagcgtcta
gtagacacgaatctgaaatcgagcttcttacctgcgaaggtatccgcccttcacggttca
ttgtatctgttgcaaagtgctgtgctcgcaaattgcgaagagacgatgaatattattcat
ccgttggcaatagaatacatacagaaacatttggacgcgcaagatttgaacggcgtgtta
agacaaagtgaagagcatcagggtgtaatgtgggctttggtattctttctattggagcat
gccgaagatactccaccagacacggaagcgccagctgtgttagaattagtccttaattta
cttacatcacaaaatatttcttgtagcttacatcaaacactcttgcaggggctcgagcga
ctcgtagcaaccaaaagcgtgataggaaaggtagccgaacagatagtaaaagttgcgatt
gatcgcttaaaacaacctagtcctatgttatcgctgccagcgttgcaattgttattgact
tgcatgtatacagaagcagcagatagattgaatcaaccggaaacggaggaaccattacca
gatgctgaaccagaagcattggttcgatccatagagcgcgcttcagcgattttcgataag
atcaggagaggacactctatggaagtggagcttttatgtacagttttgtccggtgtgctc
ggagatttcttcccaccatcggagatcttaactaaagtcataggagaatttttgtcgccg
caacaacctcacccccggctacttgccgccgttgtttttaaagtatgcgaacgagcatgc
acttgcgcgcaaatggaacttcttcaagattgggttgtatttagtttgccaaactttatt
cagagtttacctgttacaatgtcaacatggtgcttgtcttgtttttttatcagtgcatcc
acaaatcattggctgagagctttgtttccatatattcaatcaaggattggaaaatacgaa
tacgaggataagaagatattgtgcatcgctgcttcggacttctatcgaaagttatctaag
gacactcagagggaagctttcgtggaaactttcgaagcagcagcaaaggaacctggaact
ccgttcagtgacattttagcgtccttctag
DBGET
integrated database retrieval system
