Bombus affinis (rusty patched bumble bee): 126924925
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Entry
126924925 CDS
T09368
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
baff
Bombus affinis (rusty patched bumble bee)
Pathway
baff03013
Nucleocytoplasmic transport
baff03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
126924925
03015 mRNA surveillance pathway
126924925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
baff03019
]
126924925
03041 Spliceosome [BR:
baff03041
]
126924925
Messenger RNA biogenesis [BR:
baff03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
126924925
Spliceosome [BR:
baff03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
126924925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
126924925
NCBI-ProteinID:
XP_050595891
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All DBs
Position
2:12658692..12666106
Genome browser
AA seq
1203 aa
AA seq
DB search
MMYTGTTASQDTRFSDKEKKLLKQMKFGDSLTQKVDMSKVKLDVIKPWITTKITQILGME
DDVVVEFVYNQLEEKFPDPRKMQINLTGFLNGRNARSFMGELWDLLVSAQESVTGIPEAF
LQQKKDQIKKRLEEQEKLQASLAEKEKEKEREKEKDEAESKIKKEEKERGSSKERRRDRS
RDRDRDRKRSRSRDRHRDRDRSSRKRRSSSRSPSKNSLKDNGKDMTEIKVEREDSPQPEN
AIPLMPVKTKPEAAVAISRLQAKLMSIADGKKKNNRTPSPESLEKAKKSRSRSKSPISRS
KKSRSKSPSRDSKTRRSRSPASKSRRSRSKSRSRRSRSRSKSRRSKSRSQDRSKSRRTKS
KSPRSHSRSRSRSKKSRSKSIDRSKSRKSRSDSSDSRSSKSRSKSPDKRKDTLDSNRKRD
ASTSSSTESEEEKGAKDKNDFEIRKKKDGVQAKRSYRKTNKDDSGSDSDSSRERKSVPKR
RSPTPRKDRGRSKDRDRSRDRSRDRSRDRSRDRSRDRNRRRSIDRERERRRERERERERE
RLDRYSGSRSMRPPSVRRAPSRRRSPPRRSPARYRRRSPSPGDRRRRRSLDRRRRSSERR
DRRRSPDRRDSRRRSPDGRDRSLRYDRSSSRDRSSRRDRSRDRDRRDRDRRSRSRDRRSR
SKDQRSSVDHSRDGKRSPDRSRDAKEKTKDKKVDEKIKRSTDTGSRKELRNGRSKSSSSE
SSESSSSSNEDEVTRKSLERKSSQEKRERERDREHADEKRKEKEKPIKEESIKRPEKDIK
KAEPVNIKKPDLSVSPKKLQSATLPVTRHRFSKSLSRTPSPFKKTEDIIAAVKIKQPLKE
DNKEGSPKEESSFSSADTFPLKKDEKSIKSIKTTSEDKKSGQKSSEPVLLKKPAEVIKKS
KREKRDGSTDSNDSESEGKKRSKKLEKSKKSRKASTDEEKSDKCGSSSDSEEERKHAEKT
KKIRDSNRGDSLDERTKDRKDSRKREMNENESRKRPKKELEEETKKSKRSRKDSSSGDEE
QKIKRNKSEDDRSRLRKSKKDSSSDDEPKKTRKRRDSSSEDEKSRTRKSRKDSTSEDEGK
VRLKKSKRDSSTDDEEIGEKDAKKKRKADDSSDEEKVKKKRKKKTKTSTSESEESEVEEK
KKKKDKKHKKHKKHKKHRKHKKKKVADSDESDVSEGNTEELEKKLREKALKSMKKGHSIE
GSD
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atgatgtacacggggactaccgcgtcgcaggacacgaggttcagcgataaagagaagaaa
cttcttaaacaaatgaaatttggagactctcttacacagaaggtggatatgagcaaagtt
aagctggatgttattaaaccatggataactacaaagataacccagattttaggcatggaa
gatgatgtagtggtagaatttgtatataatcaactggaagaaaagtttcctgatccccga
aaaatgcagatcaacctcactggctttctgaatggaagaaatgctcgatctttcatgggt
gaactatgggacctcttggtctctgctcaagaaagtgtaacgggcattccagaggctttc
ttgcaacaaaagaaagatcaaataaaaaagcgtttggaagagcaggagaaactccaagct
tctttggcggagaaagaaaaggaaaaggaaagagagaaagaaaaagatgaagccgaaagc
aagataaaaaaagaagagaaagaacgtggttcttcgaaggagcgtcgaagagatcgaagt
agagatcgtgatagagacagaaaaagaagtcgatcgagagatcgacacagggatcgtgac
agatcgagccgcaaaagacgatcttcttcaagatcgcctagtaaaaattcgcttaaagac
aacgggaaagatatgactgaaattaaagtcgaacgagaagattcgccacaacctgaaaat
gctataccgctcatgccagttaagacaaaaccggaagccgctgttgcgatatcgcgatta
caagctaaattaatgagcattgctgatgggaaaaagaaaaacaatcgtactccatctcct
gaatcattagaaaaagcaaaaaaatctagatctagatcaaaatcacctataagccgctcc
aaaaaatctagatccaaatcgcccagtcgagattcaaaaacacgtcgttctcgatcaccg
gcatctaagtcgaggcgatcaagatctaagtcaagatcaagacgatctaggtctaggtca
aagtctagaagatccaaatccaggtcgcaagatcgctcgaaatcgagacgtacaaagtcc
aagtctccaagatcgcattcgagatctcgttcacgatctaaaaaatcaagatcgaaaagc
attgataggagtaagtctagaaaatcgagatccgattcaagcgattcaagatcatcaaaa
tctcgttcgaagtcaccggataagagaaaggatactctcgattccaacaggaaacgagat
gcaagtacaagcagtagcaccgaatcagaagaagaaaaaggagcgaaagataaaaatgac
ttcgaaattagaaagaagaaagatggagtacaggcaaagagatcatataggaaaacaaat
aaggatgacagtggtagtgacagtgactcgagtcgagaaaggaaatcagttcctaagcga
aggagtccaacgccacgaaaagatagaggtcgatcaaaggacagagatagatcgcgagat
agatcacgcgatagatcacgggataggtctcgggatagatctcgagataggaatagaaga
agatccatagacagagaacgtgaaagaagaagagaacgggagcgagaaagggaacgggag
agattggatagatacagcggcagtcgcagcatgcgacctccatctgtgcgcagagcacct
agtagacgcagaagtcctcctcggagaagcccggcacgatatcgtcgcagatcaccaagt
cccggagataggcgccgaagaagatctctcgatcgaagacgaagatcatcggaaagaaga
gacagacgtcgatctccggatcgtcgtgatagcagacgtcgttcgccagacggacgggac
cgatccctcaggtacgatagatcttcctctcgtgacagatcgagtaggcgagaccgttcc
agagacagggacagaagggatagagatagaagatctagatctagggatcgtaggtctaga
tcaaaagatcaaagatcatcggtggatcattcgagagatggaaaacgatctcccgatcgc
tcaagagatgctaaggagaagacaaaggacaagaaagtggatgaaaaaattaaaagatca
actgatacgggatcgcgaaaagaattacgaaacggaaggtctaagtcaagtagctcggaa
agtagcgaaagtagttcctctagcaatgaggatgaagtgaccagaaagtcactagagcgg
aaatcgtctcaagaaaaacgggaacgtgagagggatcgtgaacacgcagatgagaaacgt
aaagaaaaggagaagcctatcaaggaggaatccatcaaacgaccagaaaaggacatcaag
aaagctgaacctgtgaacatcaagaaaccagatctcagcgtttctcctaaaaaacttcaa
tctgctacgcttcctgtgaccagacacaggttttcgaagagtttatctcgaacgccgtct
ccgtttaaaaagactgaagacatcatagcagcagttaaaatcaaacaaccattgaaagaa
gataacaaagagggatcaccaaaagaagaatcgagcttttcatctgcggatacgttcccg
ctaaaaaaggatgaaaaatcgatcaaatcaatcaaaactacatccgaggacaagaaatca
ggtcaaaaatcgtcagagccagttctcttgaaaaagccagcagaagtaataaaaaaatcg
aagagggaaaaacgcgatggttctacagattcaaatgatagtgaaagcgaaggtaagaaa
agatcaaaaaagttagagaagtccaagaaatccaggaaagcttccacggatgaagagaag
tcagacaaatgtggttctagttcagattctgaagaggaaagaaagcacgcagagaaaacc
aaaaaaattagagactcgaatcgaggcgattcattagatgaacgtacaaaagacagaaaa
gatagcagaaaacgggaaatgaacgagaacgaatctcgtaagcgaccgaaaaaagaatta
gaagaggaaacgaagaaatcaaaaagatctaggaaagattcctcttcgggagatgaggaa
cagaagataaaaagaaataaaagtgaagacgataggtccagattacgaaaatccaaaaaa
gattctagttcggacgatgagccgaaaaagacacgaaaacgaagagacagttcttcggaa
gatgaaaagtcaagaacgaggaagtcaagaaaggattctacgagcgaagacgaagggaaa
gtacgtttgaaaaaatctaaacgagactcaagtacagatgatgaagagattggagaaaaa
gatgcgaagaaaaagagaaaagcggatgacagttcagatgaagaaaaagtgaagaaaaaa
cgtaagaagaagactaaaactagcactagtgaatcagaggaaagtgaagtagaagaaaag
aaaaagaagaaggataaaaagcacaagaaacataagaagcataagaaacatagaaaacat
aaaaagaagaaggttgcagattctgacgaatctgatgtaagtgaaggtaatacagaagaa
ttagaaaaaaaacttcgcgagaaagcattaaaatcgatgaagaaaggacacagcatagaa
ggaagtgattga
DBGET
integrated database retrieval system
