Bombus affinis (rusty patched bumble bee): 126925023
Help
Entry
126925023 CDS
T09368
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
baff
Bombus affinis (rusty patched bumble bee)
Pathway
baff03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
126925023
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
baff03019
]
126925023
Messenger RNA biogenesis [BR:
baff03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
126925023
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
TSX
Motif
Other DBs
NCBI-GeneID:
126925023
NCBI-ProteinID:
XP_050596094
LinkDB
All DBs
Position
2:complement(12292438..12295864)
Genome browser
AA seq
517 aa
AA seq
DB search
MADENEDQWLYGDSTDGKEYTPTSAQPESQENDSLPAAIQEKSETLEDQKTENVPDAPTE
TPEETEPQEEESPRADNVQNENNTEVNKNGVREVSSQEDGEAASDSDSDDDVHVVIGDIK
STPAYGSLNIKRGGLLTNASGVPDKLNKQPGKFSIDEFETIGVINGMPAHEFNLDQLEDK
PWRQPGADITDYFNYGFNEETWRAYCERQKRMRSESGVGLILNAGGGGGNAGSMRVPQVA
ITNDNSKYSGIMGPKRAGPPPGRKMAGTIDVIGSSGLASRRNLDKSPPKGNVIQVMTADR
REYSRKPGYPDMSVPPPGAGMPPAFDIPPPGYPGEPAPFYIPETDPYYQSYEPTQDNQWG
NDPTWQPTNLAIPMTEGEDDKDTGPKTIPTMVPPTNIPPIMPPRDSRDRERDRERERDRD
RELDSMGRDRERDKDRDRDREREKDSMIRERDRERDSMSRDEERDRDRSRSQYRHKDRHR
HRSRSRSRRHKSRSRSPSRRKKKSRRSERERSKEESE
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgaaaatgaggatcaatggttatatggagattcgactgacggaaaagaatac
acaccaacgtctgctcaaccagaaagccaagaaaatgattcgctccctgctgcgatacaa
gaaaagtcagaaaccttggaagatcaaaaaacagaaaatgttcctgatgcaccaacagag
acgcctgaagaaacagaaccacaggaggaagagtctcctcgagccgataatgttcagaac
gaaaacaatacagaagtgaacaaaaatggtgtacgagaagtttccagtcaagaagatggt
gaagctgctagtgattcggattctgatgacgacgtacacgttgtcataggtgacattaaa
tcaaccccagcatatggtagcctcaatatcaaaagaggaggattactcacaaatgcatca
ggagtaccagataaattgaataagcaacctggaaaatttagtatagatgaatttgaaact
ataggcgttatcaatggaatgcctgctcatgaatttaatttagatcaattagaagacaaa
ccttggaggcaacctggtgcagacattacggattactttaattatggctttaatgaagaa
acatggagagcttattgcgaaaggcaaaaaagaatgagaagtgagtctggagtaggctta
atattgaatgcaggaggaggcggcggtaatgcaggcagcatgagggtacctcaagttgca
attactaatgataacagtaaatattctggtataatggggccaaaaagagcaggtccgcct
ccaggaagaaaaatggcaggaacaatagatgtaattggtagttcaggtttggcttccaga
agaaatcttgataaatctccgccaaaaggaaatgtgatacaagtaatgactgcagatagg
agagagtactctaggaagccaggttatcctgatatgagtgtgccacctccaggagcagga
atgcctcctgcatttgatatacctcctcctggataccctggagagccagctcctttttat
atcccagaaacagacccatattatcaaagctatgaacctacacaagataaccaatggggc
aatgatccgacatggcaaccgacaaatttagctattccaatgacagagggagaagatgat
aaagatactggcccaaaaacgataccaactatggttcctcctacaaatattcctcctata
atgccacctagagattctcgagatcgtgaaagagatcgagaaagagaaagagatcgcgac
agagaactagattcgatgggacgggacagagaaagagataaggatagagatcgcgatcgt
gagcgtgaaaaggattctatgattagagaacgggacagagaaagagactcgatgtcgcga
gatgaagaaagagatcgtgacagatctcgatctcagtatcgacacaaagaccgacatcga
catcgatccagatcgcgatctcgtagacacaaatcgagatccagaagcccaagtcggcgt
aagaagaaatctagacgctctgaaagagaacgttctaaagaagagagcgaataa
DBGET
integrated database retrieval system
