Bombus affinis (rusty patched bumble bee): 126925135
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Entry
126925135 CDS
T09368
Name
(RefSeq) zinc finger protein DPF3 isoform X1
KO
K13196
zinc finger protein ubi-d4
Organism
baff
Bombus affinis (rusty patched bumble bee)
Pathway
baff03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
126925135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
baff03041
]
126925135
03036 Chromosome and associated proteins [BR:
baff03036
]
126925135
Spliceosome [BR:
baff03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
126925135
Chromosome and associated proteins [BR:
baff03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
126925135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPF1-3_N
PHD
PHDvar_NSD
PHD_4
PHD_2
Lar_restr_allev
zf_RING_Vps8
SR-25
Motif
Other DBs
NCBI-GeneID:
126925135
NCBI-ProteinID:
XP_050596383
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All DBs
Position
15:complement(10441320..10456463)
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AA seq
527 aa
AA seq
DB search
MTAITISPAAQGIIQVVNESNLCKIEGFLNDTAYREAIENSSNYNSRLCRERRLRMPFLD
SQTGVAQNHSALFMSSRERLPGLLHGQIYTYPSKRWRKKRRQYLMHYLHPKRGPRGDTED
GNEGVETVTHVNDDSKDSVALKDEHSKDAWYYDEQDMLDMDTYEEPDAESDYDYEESYSS
KRKRRKPRGGGHHPARNHPSSTDSPGGKRTKGGGRGRKKTNYDAVDTDKPFVCDLCSARY
KTRPGLVYHYGHSHSTSSGDPAKELSPSPAEVEPRSVADTAASNQPGGTRRGRQNATSSS
TSSPSPAAPSASAAGASAQPQPQSQPVQPQPQQSQQQQPQQPSQQQQPPQQQQQLPAVPP
TVAPASPTIPAVKEEHLPAVPSPGTAVPSPSSVRTEGPPTPGTNEKKAGKSAQPSPYCDF
CLGDARENKKTGGSEELVSCSDCGRSGHPTCLQFTANMIVSVRKYRWQCIECKCCSICGT
SDNDDQLLFCDDCDRGYHMYCLSPPLASPPEGSWSCRLCIAEFHRRD
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgacagcgattacaatctcgccggctgcccaaggaattattcaagttgtaaatgaaagc
aatttgtgtaaaatcgaaggcttcctcaatgacacggcatatagggaagccattgaaaat
tcttcaaattataatagccgactatgcagagaacgacgtttacgtatgcctttcctcgat
tctcaaacaggtgtagcacagaatcactctgcgctatttatgtcttcaagagaaagacta
cctggtttgttacatggtcagatatatacatatcctagtaaacgatggaggaaaaaacgg
cgacaatatttgatgcattatttacatccaaaaagaggaccaagaggtgacactgaagac
ggcaatgaaggtgtagaaactgtaacacatgtaaatgatgatagcaaagattcagtggcc
cttaaagatgaacatagtaaagatgcatggtactacgatgagcaagatatgttggatatg
gacacgtacgaagaacctgatgctgaaagtgattatgattacgaggaaagttatagtagt
aaaaggaaacgaaggaaaccacgtggaggtggccatcatcctgcacgaaatcacccatct
tctacagatagtcctgggggcaaacgtactaagggtgggggacgtgggcgcaaaaaaacc
aactatgatgccgttgacactgataagccattcgtttgtgacctatgcagcgcacggtat
aaaaccagacctggtctggtctaccattacggtcattcccactctacttcctccggtgat
cctgctaaggaactaagtcccagtcctgccgaagttgaacctaggagcgttgcagacacc
gctgcttcgaaccagccaggtggtacacgtcggggtcgtcagaatgcaacttcgtcgagt
acttcgagtccctctcccgcagcgccgtccgcgtccgctgcgggagcatcggcgcagcca
caaccgcagtctcagccggtccagcctcagccgcaacagtcgcagcagcaacaaccgcag
caaccgtctcagcaacagcagccacctcagcagcagcaacaattgcccgcggtaccgcca
acggtagcgccagcatcgcctacgataccagccgtgaaggaagaacatctgccggcggtg
ccgtcgccaggcacagctgtcccctcgccttcctcggtgaggacggaaggcccaccaacc
ccagggacgaacgaaaaaaaagctggaaagtccgcgcaaccgtccccgtactgcgacttc
tgtctgggcgatgctagggaaaataaaaagaccggcggctccgaagagttggtctcttgc
agtgattgcggtcgctcagggcatccgacttgtttgcaattcacagcgaacatgatcgtt
tctgttcgcaagtacaggtggcagtgtatcgaatgcaaatgctgttccatttgtggtact
tctgacaacgatgatcaactgctgttctgtgacgactgtgatcgtggataccatatgtat
tgtctgtctccacctcttgcgtctcctcccgagggctcctggtcttgccgtctgtgcata
gcagagtttcatcgccgtgattaa
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