Bombus affinis (rusty patched bumble bee): 126925190
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Entry
126925190 CDS
T09368
Name
(RefSeq) uncharacterized protein LOC126925190
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
baff
Bombus affinis (rusty patched bumble bee)
Pathway
baff03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126925190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
baff03041
]
126925190
03009 Ribosome biogenesis [BR:
baff03009
]
126925190
Enzymes [BR:
baff01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
126925190
Spliceosome [BR:
baff03041
]
Complex A
U1 snRNP components
U1 related factors
126925190
Complex B
126925190
Ribosome biogenesis [BR:
baff03009
]
Eukaryotic type
Pre-60S particles
Helicases
126925190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
TFIIA
DUF6505
Motif
Other DBs
NCBI-GeneID:
126925190
NCBI-ProteinID:
XP_050596453
LinkDB
All DBs
Position
15:complement(2701243..2715350)
Genome browser
AA seq
713 aa
AA seq
DB search
MYNNSYSNRTSYRPRGSRDSSNRNGGGTYWNSQQQQKEKSLKKQVQRRTPGDSLKKPIWD
LAKLPVITKNLYIPHINVLKRSTDEVTKYHIGKEITVKGNNTPSPIQAFEESNFPDYVME
EIRKQGFAEPTAIQAQGWPIALSGRDLVGIAQTGSGKTLAYILPATVHINNQPRLNRGEG
PIVLILAPTRELAQQIQSVARDFGSSSCIRNTCIFGGSPKGPQARDLERGVEICIATPGR
LIDFLEKGTTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPKEVQ
ALAEDFLSDYIQINIGSLTLAANHNIRQIIEICQEHEKETKLSGLLREIGKDRGSKMIIF
VETKKKVDDITKAIKREGWPAISIHGDKSQPERDYVLSEFRNGKTMILVATDVAARGLDV
EDVKYVINFDYPNSSEDYIHRIGRTGRCQSAGTAYAYFTPNNARQAKELISVLEEAGQTI
NPQLADLANSIKPAYGKGRQRWSHSRSNKDSNSTGSPRNNSSPISNNWQAQHVQSTQHNG
NSQERTVVRQQNAYQTNRQNTFQSNYQQHQQQSQQQQHQQHQQQQHQRQSNTYTNSCQTS
NSYQAGYQNANIPRYHGRTGGFQSNRYHNRQNAYSTNQTAGGQSVYSMPPPFMMPSAGGH
TDSGMQSLVNNKFFQTNRPPPNTGACAYQSMGYSQFQAVPPYTYPYPPTPVQQ
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgtataacaacagttattccaatcgtaccagttacagacccaggggaagtagagactct
agcaatcgtaatggaggaggaacatattggaacagccagcaacaacaaaaagagaagtca
cttaagaagcaagtccaaagaaggactcctggagattcattgaagaagcctatatgggat
ctggctaaattaccagtgatcacaaagaatttatatattccacatatcaatgttttaaaa
agatcaaccgatgaagttaccaaatatcacattggtaaagaaatcactgtaaaaggaaac
aatactccttctccaattcaagcgttcgaagaaagtaacttcccagattacgtgatggaa
gagattagaaagcagggctttgctgaaccaacagcaattcaggcacagggctggccaata
gcacttagtggacgcgacttggttggaattgctcaaacaggatctggaaaaactctagct
tatattttaccagcaaccgtacacattaataatcaaccacgtttgaaccggggagagggg
ccgatcgttttaatacttgccccaacaagagagttagctcagcaaattcaatccgttgct
agggactttggttcctcctcgtgcattcgtaacacttgcattttcggtggttccccgaaa
ggacctcaagctcgcgatttagagcgcggcgttgagatatgtatcgcaactcccggtaga
ctgatcgattttctcgagaagggaaccacgaacttgcgcagatgcacatatcttgtattg
gatgaggcagatagaatgttggatatgggattcgagccgcaaattcgaaagattattgaa
caaattagacctgatagacaggtattgatgtggtcggcgacatggcccaaagaagtgcaa
gctttggctgaagatttcctctcagattacattcaaattaacataggttctctgacgttg
gctgctaatcacaatattcgtcaaatcatagagatttgtcaagagcacgagaaagaaact
aaactttcaggtctattgagagaaattggtaaagacagaggaagcaagatgattattttt
gttgaaacgaaaaagaaggtggacgacatcaccaaagctattaaacgagaaggttggcca
gctatctctattcatggtgacaaatcacaacctgaaagagattacgtgttatccgagttc
agaaacggaaaaacaatgatccttgttgctaccgatgttgctgctcgtggcttggatgtt
gaagacgtaaagtatgtaattaatttcgattatccgaacagttctgaggattatattcac
cgaatagggagaaccggacgttgccaaagtgcaggtacagcatatgcttactttacgcct
aataacgctagacaagcgaaggaactgatttctgttctggaagaagctggtcagacgata
aatcctcaactggcagatttagcaaactcgataaaacctgcgtatggtaagggccgccaa
cgttggagtcattctcgctctaataaggatagtaattcaactggaagtcctcgaaacaat
agcagtcctatttcaaacaattggcaggctcaacatgttcaaagtactcaacataatggt
aacagtcaagaaaggactgttgtacgccaacaaaatgcataccagaccaaccgccagaat
actttccaatctaattatcagcaacaccaacaacagtcacagcagcaacaacaccaacag
catcagcagcaacaacatcaacgacaatcgaatacttatacaaacagctgtcaaactagc
aatagttaccaagctggctatcagaatgcaaatatacctagataccatggaagaacaggt
ggtttccaaagtaatcgttaccataatcgtcagaacgcatacagcactaatcaaacagct
ggaggacaaagcgtgtattctatgccacctccgttcatgatgccatctgctggtggacac
acagattcaggaatgcagagtcttgtaaacaataagtttttccagacaaatcgtccacca
ccgaataccggggcctgcgcataccaatcaatgggatacagccagttccaggctgtgccg
ccgtatacttatccttatccgcctacaccggtacagcagtga
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