Bombus affinis (rusty patched bumble bee): 126925382
Help
Entry
126925382 CDS
T09368
Name
(RefSeq) nuclear RNA export factor 1-like
KO
K14284
nuclear RNA export factor
Organism
baff
Bombus affinis (rusty patched bumble bee)
Pathway
baff03008
Ribosome biogenesis in eukaryotes
baff03013
Nucleocytoplasmic transport
baff03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
126925382
03015 mRNA surveillance pathway
126925382
03008 Ribosome biogenesis in eukaryotes
126925382
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
baff03019
]
126925382
03009 Ribosome biogenesis [BR:
baff03009
]
126925382
Messenger RNA biogenesis [BR:
baff03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
126925382
mRNA cycle factors
Stress granule specific factors
126925382
Ribosome biogenesis [BR:
baff03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
126925382
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NXF_NTF2
LRR_NXF1-5
TAP_C
Tap-RNA_bind
UBA_4
UBA_8
LRR_8
NTF2
LRR_4
Motif
Other DBs
NCBI-GeneID:
126925382
NCBI-ProteinID:
XP_050596816
LinkDB
All DBs
Position
16:3161699..3163924
Genome browser
AA seq
524 aa
AA seq
DB search
MQRTSLPIVPMQLDSSIAIKISMGGSMFQERTLMGRSDVWHKVKILKGTQYSRESVLKAI
LSAIEPAELIPVKYQASGEDTFFLARNCAHALDKLCKTNLIIKNPDGDPLILIVTLGFAS
IQDLKFNIQPLILTALTKMYNSNRKTLDLSEFHKDSEMSNTIYCPLSQQRTFCHVLKLTK
TSIAKVEHLNLQKNELFNLIPIETSGLTSIKYLDLRYNNLISMEALTPLKNLCILKLWLD
GNPLCENYSSSKQYIDSAMKYCPNLFQLDGVYIRTSGLPFTYTNYFRNESREGLVTKFVN
HFFALYDQRDRTVLRGLYCKNAFYSMSLAIPAAVAHKRNLVQFTASRNLLKNVDSNKKRQ
QHLYYGQDNILVSLKRLPRSYHDRNSFVLDIMYDDGKCLAISVCGLLRIISTTSQILWFN
RTFIIQAGPDHEYNIINDQYLLDSTIQEIPPNNIEGRFHDDIVPSCFSVSEKKELVAKFV
DATRLNTDWCQTYLEEAKWDIRKAISNFMKDYKSSAVPNEAFQK
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgaacaagtttgccaattgtgccaatgcaactggattcctccattgctataaaa
ataagtatgggaggatctatgttccaagaaaggacattaatgggtcgttcagatgtgtgg
cacaaagttaaaattctgaaaggaactcaatacagcagagaaagcgtattgaaagccata
ctgagtgctatcgaaccagcagaattgatccctgttaagtaccaagccagtggagaagat
accttttttttggcacgtaattgtgctcatgctctggacaagctatgcaagactaactta
ataatcaaaaatccagatggagatccactgatcttgatcgtaactttaggatttgcatcc
attcaagatctgaaattcaatattcagccattgatcttaactgctttgaccaagatgtac
aattctaatagaaaaactttagacttgtcagagtttcataaagactctgaaatgtctaac
accatatattgtccgttatctcaacagagaactttttgtcatgttttaaaattaacaaag
acttcaattgccaaggtagagcacctgaatcttcagaaaaacgaactgttcaacctgatt
cctatagaaacttctggtttgacttctataaagtatctggatttaaggtacaataacttg
atatctatggaagcacttactcctttaaaaaatctgtgtatactgaagttatggttagat
ggaaatcctctctgcgaaaattactctagttctaaacagtacatagactctgctatgaaa
tactgtcccaatttgtttcaattggatggagtttacattagaacatctggcctaccattc
acctatactaattactttagaaatgaatctagggaagggttagtcaccaaattcgtcaac
cactttttcgctctgtacgatcagagggatagaacagttctgagaggattgtattgcaaa
aatgcattttattccatgagcttggcgattccagcagctgtagctcataaacggaacctc
gttcaatttacagcaagtagaaatttattaaaaaatgtggattcaaataagaaacggcaa
cagcatctttattacggacaagataatattctagttagtctaaagagattaccacgatcc
tatcacgatagaaattcttttgtattggatataatgtatgatgatggcaaatgcttagca
atctcagtttgcggactattgaggatcattagcaccacatcgcaaattctgtggttcaac
agaacgttcattattcaagctggtcctgatcacgaatacaatattataaatgatcagtac
ctattagattctactatacaagaaattccaccaaataatatagaaggaagatttcacgac
gacatcgtaccatcgtgctttagtgtaagcgagaaaaaagagttagtagccaaatttgta
gacgcgaccaggttgaacaccgactggtgtcagacttatttagaagaagctaagtgggac
ataagaaaagcaatttcgaattttatgaaggactataaatcttccgccgttcctaacgaa
gcatttcaaaaataa
DBGET
integrated database retrieval system
