Bombus affinis (rusty patched bumble bee): 126925549
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Entry
126925549 CDS
T09368
Name
(RefSeq) probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase isoform X1
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
baff
Bombus affinis (rusty patched bumble bee)
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
baff03009
]
126925549
Enzymes [BR:
baff01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
126925549
Ribosome biogenesis [BR:
baff03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
126925549
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltr_RsmF_N
BMT5-like
FtsJ
Methyltransf_31
Cwf_Cwc_15
GCD14
Motif
Other DBs
NCBI-GeneID:
126925549
NCBI-ProteinID:
XP_050597180
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Position
16:8543926..8548421
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AA seq
602 aa
AA seq
DB search
MGRKAKFNDTTLSSGHGRKAKKQGDPTFPKGVLEEKELSHRQKQRARKRLLKKQKLNEKV
RKLQKKSGEKVEDNVNEDDLKDISKLLKIKKKKKSLKEGPRNDSSSRKNDQMQFDNDINM
SDNEEVIQDQQRKIKRKKLLDNDTEDETDKGSSDNEEYGQNGEMDYEEVDQSEEDGDSSN
NDDADLLPIEKANKKLKKKQEEEQKLAEEEMHDMTLQQCVFTFPTKEELADVTNLKDVQQ
RIKDVIMILSDFKRLRDINRSRTEYMDLLRSDLCTYYSYNNFLMEKLIQIFPLDELLEFL
EASEVQRPMTIRTNILKTRRRDLAEALINRGVNLDPIGKWTKVGLVIYSSQVPMGATPEY
LAGHYILQGASSFLPVMALDPKENERVLDMCAAPGGKSSHIAALMKNTGVLFSNDVNEER
IKAVVGNFHRLGITNSIVCTYDGRKLPTVIKGFDRVLLDAPCTGTGVVSKDPSVKTNKDE
VDIQRCCTLQKELLLAAIDCANARSESGGIIVYSTCSILPEENEWVIDFALKKRDVKLIP
TGLEFGAEGFTSYRQYRFHPSLKLTKRFYPHVHNMDGFFVAKLKKFSNIVHKNKDAEEET
FD
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgggacgaaaagctaagtttaatgacacaactttgtcgagtggtcatggaagaaaagca
aagaagcaaggagatccaacatttccaaagggagtactagaagaaaaggagttaagtcat
agacagaagcaacgagccaggaaaagattattaaagaaacaaaagttaaatgaaaaagta
aggaaattacagaaaaagagtggcgagaaggtggaggacaatgtaaatgaagatgatcta
aaagatatctcaaaactattaaaaataaagaaaaagaagaaatctcttaaagaaggtcca
agaaatgacagttccagtcgtaaaaatgatcaaatgcagtttgacaatgatattaatatg
tctgataatgaagaagtaatacaagaccagcaacgaaagattaaaagaaagaaattactt
gacaatgacacagaggatgaaactgataaaggatccagcgacaatgaagaatatggtcaa
aatggagaaatggattatgaggaagtggatcaaagtgaggaagatggtgatagttctaat
aacgatgatgctgatctacttcctattgagaaagcaaataagaagttgaaaaagaagcaa
gaagaagaacaaaagctagcagaggaggaaatgcacgatatgaccttacaacaatgtgtc
tttacttttcccactaaagaagagcttgcagatgttactaatctgaaagatgtgcaacaa
cgcataaaagacgttattatgatattatcagattttaaaaggttgcgcgatataaataga
tcgcgtactgaatatatggaccttcttagaagtgatttatgtacatactatagttataat
aatttcttgatggaaaaactgatacaaatatttccactggatgagttattagaatttttg
gaagcaagtgaagtccagaggcctatgacgatacgaacgaatatattgaaaacacgtcgt
cgcgacttagctgaagctttgatcaacagaggggtcaatttagatcctattggcaaatgg
acaaaagttggattagtgatttattcgtcgcaagtgcctatgggtgcgacaccagagtat
ttagcaggacattacattcttcagggtgcatctagcttcttacctgttatggctttggat
cctaaagaaaacgagagggttcttgatatgtgtgccgcgcccggaggaaaatcatcacac
atagcagcgcttatgaaaaacacaggtgtactcttctcgaacgatgtaaacgaagaaagg
ataaaagcagttgtcggcaattttcacagacttggcatcacgaattcaatcgtttgtact
tacgatgggcgaaagttaccaacagtgattaaaggtttcgatagagtattattagacgca
ccatgcactggtactggtgttgtttcaaaagatccaagtgttaaaacaaacaaagatgaa
gtagatatacagcgttgttgtacattacaaaaggaattacttttggcggctatagactgt
gctaatgcacgttcggaatccggtgggattatcgtttattctacgtgttcgattcttccg
gaagaaaatgaatgggttattgattttgctcttaagaaacgtgatgttaaattaataccg
accggactggaatttggcgccgaaggttttaccagttatagacaatacagatttcatcct
tcgttgaaattaaccaaacgattttatccccatgtgcacaatatggacggattttttgta
gcgaaattaaaaaagttctccaatattgttcacaaaaacaaagatgcagaggaagaaact
tttgattaa
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