Bombus affinis (rusty patched bumble bee): 126925572
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Entry
126925572 CDS
T09368
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR-like
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
baff
Bombus affinis (rusty patched bumble bee)
Pathway
baff04137
Mitophagy - animal
baff04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
126925572
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
126925572
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
baff04121
]
126925572
Enzymes [BR:
baff01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
126925572
Ubiquitin system [BR:
baff04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
126925572
Multi subunit type E3
ERAD complex
126925572
LMBR1L-GP78-UBAC2 complex
126925572
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
zf-RING_UBOX
CUE
zf-RING_11
zf-rbx1
zf-RING_5
zf-ANAPC11
zf-RING_16
Prok-RING_4
LPD39
Motif
Other DBs
NCBI-GeneID:
126925572
NCBI-ProteinID:
XP_050597217
LinkDB
All DBs
Position
16:complement(2501613..2520030)
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AA seq
599 aa
AA seq
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MPIEFLDRLPMPNLRLYTAISFGVLSCSIYYAVQIIKDPAWKITHTYVDSENDSANNIDF
DPRDSAMYMKELLECMLDEPICIWTLINMAYCVLILLGKTIQKLVFAELRVSERQHLKDK
FWNFVFYKFIFVFGVLNVQYMDEVLLWWAWFTALGFLSLLSQLCKDRFEYLSFSPTTPGW
SHAKLLGLLATILALSSFMLLLCTAAAFFFVSFNTFIFTAAECILLGVRTIHVMVRYIIH
LYDTRGAGTSSQRSWDKRGPLTYYTDLTAELIVLAVDFLHHIHMLLWSNIFLSMASLVIC
MQLRYLFYEIQRKITKHRNYLAVLNHMEQNYPMASQEELAENSDNCAICWEKMETARKLP
CAHLFHNSCLQSWLEQDTSCPTCRLALNMQPSHLVNTQELSTELQTPARRNENHFFHFDG
SRYVSWLPSFSVEVSHNRLRGNISTITHNNSQMDTMIRQVQQLFPQFPRNLIVEDLRGTR
SIEWTVANILDGVLMSPHHIIEEPQLESVLQIHTSTTETSVSLNTSSMPLPSDPRFDIPL
ADSGEEPSSLGGRFSKSSSEREQILQRRKELLRLTAKEKYLEKCREKHEADESVSNATS
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgccgatagaattcttggaccggcttccaatgccaaatctccggctgtatacggcaata
agcttcggcgtgttatcctgctcgatatactatgccgttcaaatcatcaaagacccggca
tggaagatcactcacacttacgtggactccgaaaatgactcggccaacaacatcgacttc
gatccgagggattccgcgatgtatatgaaggagttgctcgagtgcatgctcgacgagcct
atctgcatctggactttaatcaacatggcgtactgcgtgctaattctgctgggtaaaaca
attcagaagctcgtattcgccgagttgcgagtctcggaaagacaacacctaaaggacaag
ttttggaacttcgtgttctacaaatttatcttcgtattcggcgtgctgaatgtgcagtac
atggacgaggtgctactgtggtgggcttggttcaccgcgcttggcttcctaagtctcctc
agtcaactatgcaaggatcgattcgaatacttatcgttttcgcctacaacgccaggttgg
agtcatgcgaaacttcttggacttctcgcgactattcttgcgttatcctccttcatgtta
ctcctatgcacagctgcagcgttcttctttgtttcattcaatacctttatcttcactgca
gctgagtgcattttactaggtgtcagaacaattcatgtaatggtgcgatacataattcat
ctgtatgatactcgaggggctggaacctcttcacaacgttcttgggacaaaaggggtcct
ctaacttactatacagatctaacagcagaattaatagtactagctgtagattttcttcac
catatccacatgctactttggagtaacatattcctaagcatggcatcccttgtaatctgt
atgcaacttaggtatcttttctatgagatacaacgcaagatcacaaagcacaggaactat
cttgctgtattaaatcatatggaacaaaactatccaatggcaagtcaggaagagttagca
gagaactcagacaactgcgccatttgctgggagaaaatggaaacagctagaaagctacct
tgtgctcatcttttccacaattcctgtttacagtcttggttggaacaggatacttcctgc
ccaacttgtaggcttgccttaaacatgcaacctagccaccttgtaaacacacaagaatta
tcaactgaactacaaacgccagctagacgaaatgagaatcatttctttcatttcgatggc
tcaagatatgtgtcctggttaccaagcttctccgttgaagtttcccacaatagactacgt
gggaatatttctactattacacataacaactcgcaaatggatactatgattagacaggtg
cagcaactgtttccacaattcccccgcaatctaatcgtagaagacctcagagggacgaga
tcaatcgaatggaccgttgcaaatattctggatggtgttttgatgtctcctcatcatata
atcgaagagccgcaattggaatccgtccttcaaatccataccagtaccacagaaactagt
gtttctttgaatacctcttcaatgccgctaccttcagatccaagatttgatattcctctt
gctgatagcggtgaagaaccttccagcctaggaggacggttttccaaatcatcgtccgaa
cgagaacaaatcctgcagcgtcgcaaagaactgctgagactcactgctaaggagaaatat
ctcgagaagtgtcgagaaaagcatgaagctgacgaaagtgtttctaatgccacctcttaa
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