Bombus affinis (rusty patched bumble bee): 126925731
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Entry
126925731 CDS
T09368
Name
(RefSeq) probable ATP-dependent RNA helicase kurz isoform X1
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
baff
Bombus affinis (rusty patched bumble bee)
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
baff03009
]
126925731
Enzymes [BR:
baff01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
126925731
Ribosome biogenesis [BR:
baff03009
]
Eukaryotic type
90S particles
Helicases
126925731
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHX37_C
OB_NTP_bind
HA2_C
Helicase_C
DEAD
AAA_19
AAA_22
nSTAND3
HA2_N
ATPase
Flavi_DEAD
ResIII
AAA_30
AAA_16
Helicase_RecD
Motif
Other DBs
NCBI-GeneID:
126925731
NCBI-ProteinID:
XP_050597570
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All DBs
Position
16:complement(5335996..5341273)
Genome browser
AA seq
1193 aa
AA seq
DB search
MRRKKYNCKARNIAEVEIDNSATKKIPIDIKYREDNYDNCNALVLPNEKRRTKSKVKKVT
TTRLLSKKRRKQLEKVIEKKKKKLRRTELLEELGKVQAPQEELKQYISLTSVQTKGLKRH
FREMELPVKEHIIKSNNENEDMLEVPINAIKGSKKRRMAILKQQKVQDAVSDPNVIGFDE
PSNSESESNSEDNEDREQKNAAETSEENENISNKEDNIVENSVTESTMEEQEKPIENQTT
ISKELLKPQQPIEKTPATFVILERKPEIQAARLKLPVVAEEQAIIETINENPVVIITGET
GSGKTTQVPQFLYEAGYAQEKIIGITEPRRVAAISMSKRVAEEMNLTEEKVSYLIRFEGN
VTPETKVKFMTDGVLLKEIQSDFLLTKYSIIILDEAHERSVYTDILIGLLSRIVPLRNKR
KNPLKLVIMSATLRVEEFVENSKLFKTKPPVLTVESRQFPVTIHFNKRTSINYVSDALKK
AIKIHTRLPDGGILIFLTGQREVNYVVRKLRGAFPVKNKKKIANKMKEPQKTNDSSRKED
DIKNNSDNEGKSDNSDDDDDDFRCKEAIRYNKLRQKKKVQLPNINLDDYSVIPTDDTHED
LIGAEDDEGIQLDEDEDEDDDVIDLKACADAQPLWVLPLYSLLQSHKQARVFEPPPEGHR
LCVVSTNVAETSLTIPNIKYVVDCGRCKTRMYDKVTGVSTYRICYTSKASANQRAGRAGR
TGPGHCYRLYSSAVFNDQFEQFSQSEIQRKPVDDLLLQMKVMNIDKVVNFPFPTPPDTIQ
LQIAEKRLMILGALQQQTSGKEGSYSAKVTPLGRSIAAFPVAPRYGKMLALSHQYDLLQY
TVCMVAALSVQEVLMEAFDMDGDSRNKWLQMRRFWAGTGNSLLLGDPMVLIRAVGSAEYA
GTKGRLLPFCEEHGLRHKAIVEIRKLRQQLTNEINLNIEDLNLTINPQMKPPTDIEAKLL
RQIVLAGMADQVARKVMPDEVNEDQDKAKWKYAYKTTDMEDPVFIHSSCVLRKACPEWVV
YQEIYETNKMYMRGVTTIEPEWLPKFAPSLCQLGEPLTDPPPRYDPETGKVMCNIAGTFG
RAGWKLPVMDVEYPLSVDGVKWFACFLLEGKVCPKLKQFVPSLLSTPQSINKTWAKLIPR
TQEMTQLLLSRGIMSRGQLLETWEADKNFLLSAYQKWLPESAHGHVMLIWPPV
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atgaggaggaaaaagtataattgcaaagcgagaaatatcgcagaagttgaaattgacaat
tctgcgactaaaaagattcctatagacataaaatatcgtgaagataattacgacaactgt
aacgcgctagttctcccaaatgagaaaagaagaacaaaaagcaaagttaaaaaagtcact
actacacggttattatccaagaaacgtagaaaacaattagagaaagttatagaaaagaag
aagaaaaaattacgtaggactgaacttttagaggaattggggaaagttcaagcaccacag
gaagaactgaaacaatatatatctttgaccagtgtacaaactaaagggctgaaacgtcac
tttagagaaatggaattacctgttaaagaacatataatcaaatcaaataatgaaaatgag
gacatgttagaagtacccataaatgctattaaaggtagcaagaaaagaaggatggcaatt
ttaaaacaacaaaaagtacaggatgctgtttcagatccaaacgtcattggatttgatgaa
cctagcaatagtgaatctgaatctaattctgaggacaatgaagacagagagcagaaaaat
gcagcagaaacttcggaagaaaatgaaaatatttcaaacaaagaagataatattgtagag
aatagtgtaacagaaagtactatggaagaacaggaaaagccaattgaaaaccaaaccact
ataagtaaagaattgttaaaaccacagcagccaatagaaaaaacgcctgccacgtttgta
atactggaaaggaaaccggaaatccaagcagctagattaaagttgccagtggtagcagaa
gaacaagctataatagaaacaattaatgaaaatcctgttgtaataatcactggtgaaacg
ggaagtggtaaaacaactcaggtacctcaatttctctatgaagctggctatgctcaagaa
aagataattggaataacagaacctagaagagtggcagctatatctatgagcaaacgtgtc
gccgaagagatgaatctcactgaagagaaagtctcttatttgattcgttttgaggggaat
gttacgccagaaacaaaagtcaaatttatgactgatggcgtattattaaaagaaatacag
agcgattttttactgacgaaatattcgataatcatccttgacgaagcgcacgaacgtagt
gtgtatactgatattctgataggcttgctatcacgaattgtaccacttcgaaataaaagg
aagaatcctctgaagctcgtgatcatgtcagccactttacgcgtggaggaatttgtagaa
aatagtaaattgttcaaaacaaaaccgccagtattaacagtggaatcgagacagtttcct
gttacgatacattttaataaaaggacaagtatcaattacgtttctgatgctctaaagaaa
gccataaaaatacatactcgtcttcccgatggtggaatcttaatatttttaacagggcaa
cgggaagtaaattacgtagtacgtaaattacgcggagcttttcccgtgaagaataaaaag
aaaattgcaaacaagatgaaagaaccgcagaagactaatgattcttcaaggaaagaggat
gacataaaaaacaacagtgataatgagggcaagagtgataatagtgatgacgatgatgat
gattttcgttgcaaggaagctattcgttacaacaaattacgacaaaaaaagaaagttcaa
ttaccaaatattaacctggatgattactctgtgattcctaccgatgacactcacgaagat
ttaattggcgcagaagatgacgaaggaatacaattagacgaggatgaagatgaagatgac
gacgtaattgacttaaaagcttgtgcagatgctcaaccattgtgggttttaccattatat
tctctgcttcagagtcacaaacaagcaagggtattcgagccacccccagaaggacaccgt
ttatgtgtagtatcaacaaacgtagcagaaacttctttaactatacctaacataaagtat
gtggtagactgtggacgttgtaaaacaagaatgtacgataaagtaactggagtaagcaca
tacagaatctgctatactagcaaggcatctgctaatcaacgagcagggagagctggtaga
actggtcctggacattgttacagattgtactcttcagcagtgttcaatgatcagtttgaa
cagtttagtcaatcagagattcaaagaaaacctgtggatgatttactgttacagatgaaa
gtcatgaatattgataaggttgttaatttcccattcccaactccaccggatactatacaa
ttacaaattgctgaaaaaagattgatgatacttggagctttacaacaacaaacttccggc
aaagaaggttcctatagtgccaaagtaacgccactcggtcgcagtatcgctgcatttcca
gttgctccacgttatggaaagatgttggctctctctcatcaatatgaccttctgcagtat
acagtgtgtatggtggctgcactttctgttcaagaagtattgatggaagcattcgatatg
gacggcgattctcgaaataaatggttgcaaatgaggcgcttctgggctggcaccggaaat
agcttacttcttggcgatccgatggtcttaattagggctgtagggagtgcagaatatgct
ggaactaaaggaagattacttcccttttgcgaagagcatggtttgcgacacaaagcaatt
gtggaaattcgaaagctccggcagcagctaacgaacgaaattaatttgaatattgaggat
ttgaatctcactattaacccacagatgaaacctccaaccgatatagaagccaaattactc
aggcaaatagtccttgcaggaatggctgatcaagttgcaaggaaagtgatgccagatgaa
gttaatgaagatcaagataaggctaaatggaaatacgcttacaaaaccacagatatggaa
gatccagtattcatacattcctcatgtgttcttcgaaaagcatgtcctgaatgggtagtt
tatcaggaaatatacgagacgaataaaatgtacatgcgtggtgttacaactatagaaccc
gaatggctacctaaatttgctccatctctatgtcagcttggagaacctttgactgatcca
ccaccaaggtatgatccagaaactggaaaggtaatgtgcaatatagcaggaacatttgga
agagcaggttggaagttaccagtaatggatgtggagtacccactatccgtagatggagtt
aaatggtttgcatgtttccttttagaaggaaaagtgtgtccaaaattgaaacagttcgtt
ccttcattgttatcgactccccaaagtatcaacaagacatgggctaaattaataccacga
acacaggaaatgacgcaattattactgtcccggggaattatgtcaagaggacaattatta
gaaacttgggaagcagataaaaatttccttctgtctgcttatcagaaatggttgccagaa
tcagctcatggacacgttatgctcatttggccacctgtatga
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