Bombus affinis (rusty patched bumble bee): 126925985
Help
Entry
126925985 CDS
T09368
Name
(RefSeq) protein Smaug homolog 1 isoform X1
KO
K27396
protein Smaug
Organism
baff
Bombus affinis (rusty patched bumble bee)
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
baff03019
]
126925985
Messenger RNA biogenesis [BR:
baff03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
126925985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
PHAT
SAM_2
Motif
Other DBs
NCBI-GeneID:
126925985
NCBI-ProteinID:
XP_050597966
LinkDB
All DBs
Position
2:complement(16047147..16058081)
Genome browser
AA seq
613 aa
AA seq
DB search
MKWSPGALFCEQVGELTRVFSQWNECEQTVVLYALLRRIPAVQARFLAQAVQHSLHSVSE
LDTQELNANNPAFINSLLSESTEIAINQLLTHLPLLRPGNIECKQCYLVAIPELVSHCVT
TGQFTEQTQQLLSYCLIHPAITSQDRRSLTQWLRHLEERISGTPPIQSLEDYTSTTIRWD
NAWQRNSKQQSEQTSLFGTQPGTAFNLQFPPPVTRQRRSNSLTPPVAPSHHLEVVDRSNN
INCTTKHKPRSFSVSGDHTSNLIGLGPLSPQSSCASSGSEGRLDETSTRSLASGMRDVPS
WLKTLRLHKYSYLFVTLSYEEMLQLTEEQLAEQGVTKGARHKLALSIAKLQQRYTTLLNL
EKDLLQPTRDNTQSASFLQGPTVLVNTIDELKTILATPMKPSQENDLQDIPAQFTKVLGK
LCSRLALDSVDDGILCACINILEKVLQHDCFTPNQKEKVQQWRSRLGNPRPTPKWQHNYG
YNNRRYCNPQQHNRKPSLNLGHIHNTHPQNSSFVVSTHRNSISTPYLQNNQNQSVNQNTL
RPVHATKKRPSLQESSLQQLQRTLQRTYSAPRDHFLSPSNNNASETTEPEINSRLESLCL
RMTEQAIGGFGEA
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgaagtggtcacccggtgctctattctgtgaacaagttggtgaattaactcgagttttc
tcacaatggaatgagtgtgagcaaactgtagttttatatgcactacttcgtcgcattcct
gcagttcaagcaaggtttcttgcacaagcagtgcaacattccttgcactccgtttctgaa
ttagacacacaggaactaaatgctaataatccagcatttattaactcattgctatcagaa
tcaacagaaattgctataaatcaacttctaacacatttgccattattaaggcctgggaat
atagagtgcaaacaatgttatttagtagcaataccagaattagtgagccattgtgtaact
acagggcaatttaccgaacaaacacaacaactgttaagttattgtttgattcatccagct
ataactagtcaagatagacgttccttgactcagtggcttcgacatcttgaagaacgtatt
agtggtacaccaccaatacaaagtctcgaagattacactagtactactattagatgggat
aatgcatggcagcgaaattctaaacagcaaagtgaacagacaagtttatttggcacacaa
ccaggcactgccttcaatttgcaatttcctccacctgtaactcgtcaacgacgatcgaac
agtttaacaccacccgttgctccatcacatcatctagaagttgttgatcgcagtaacaat
ataaattgtacaactaaacataagccacgaagcttcagcgtatctggagatcatacaagc
aatcttattggattaggcccattgagtcctcaaagttcttgcgcaagtagcggcagcgaa
gggcgtttagatgaaacatctacccgatcgcttgctagtggtatgagagatgtcccatca
tggcttaaaactttacgccttcataaatatagttatctatttgttactctcagttacgaa
gaaatgcttcagttaaccgaggaacaattagcagaacaaggcgtgacgaaaggggcccga
cataaattggctctttctatcgcaaaattgcaacaacgctatacaacacttctaaattta
gagaaagacttattacaaccaacgcgcgataatacacaatcagcttcgtttttacaaggt
ccgacagtgttggttaatacgatcgatgaattaaaaactatcttagctactcccatgaaa
cccagccaagaaaatgatcttcaggatatacctgcacaattcaccaaggttcttggaaaa
ctgtgtagccggttggcactggatagcgtggatgacggtattttatgcgcttgtattaac
atattagagaaagtattgcagcatgattgctttactccaaatcaaaaggagaaggtacaa
caatggcgcagtagacttggaaatccacgaccaactccaaagtggcaacataattatggc
tacaataatagaaggtactgtaacccccagcagcacaatagaaaaccaagtttaaactta
ggacacatccataatacacatccgcaaaacagttcttttgtggttagcactcacagaaac
agtatatctacaccatatttacaaaataatcagaaccaaagcgtaaatcagaatacttta
cgtccagtccacgcgaccaaaaagcgacctagtttacaagaatccagtttacagcagtta
caaagaacgttacaacgcacatacagtgcaccgagggatcattttcttagcccgagtaac
aacaacgcgtccgaaacaacggagccagaaatcaactctcgtctcgaatctctttgttta
agaatgacggaacaagcaatcggtggtttcggtgaggcctaa
DBGET
integrated database retrieval system
