Bombus affinis (rusty patched bumble bee): 126926260
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Entry
126926260 CDS
T09368
Name
(RefSeq) low-density lipoprotein receptor-related protein 6
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
baff
Bombus affinis (rusty patched bumble bee)
Pathway
baff04150
mTOR signaling pathway
baff04310
Wnt signaling pathway
baff04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
126926260
04150 mTOR signaling pathway
126926260
09133 Signaling molecules and interaction
04519 Cadherin signaling
126926260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
baff04131
]
126926260
Membrane trafficking [BR:
baff04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
126926260
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
EGF_LRP2
SGL
LRP1-like_beta_prop
Vgb_lyase
cEGF
EGF
PRKCSH-like
Motif
Other DBs
NCBI-GeneID:
126926260
NCBI-ProteinID:
XP_050598474
LinkDB
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Position
17:complement(1718021..1727912)
Genome browser
AA seq
1606 aa
AA seq
DB search
MAIISLIIILIACFFKLVLLSNGSPTLLFVTQKDIRMANASRTNKVTTIIKDLSEGAALD
FYFEHELVCWSDSGLEIIQCIQTNGTHTGEKTIVVNSSLISPDGLACDWYTGKLYWTDGE
KNRIEVTSIDGRHRKVLFWTDIYQPRAIALVPMKSILFWTDWGDVPKIERAAMNGDPSTR
EVIISDDIFWPNGLTVDYENELVYWVDGRLKFIAVMDYYGKNRRKVIEKGLDYPFAVTFF
DHKLYWTDWKTWCVHSYDVRQTQALPRELLHGEYIPGDIEVWDVRRQPYGSHPCERNNGN
CSHLCLLSMTEPGYSCACPTGVKLVDNLTCAQGPEELLLIVQRNEICRISLDSPDYTNFV
LPLTGIKHAIAIDFDPVQEMLYWTDEEARAIRRASLDGSNQENIIITEVENPDGIAVDWL
ARNLYWTDTGTDRIEVARLNGTSRKVLINEDLIEPRAIALAPELGWMFWTDWNEKRPKIE
RSNLDGTERILLVNKDIVWPNGIALDLARWKIYWCDAKTDKIEVCNMDGTDRREVITDNL
PHLFGLSLLGDYLYWTDWQRRSVDRAHKLTGGEREVIVDQVPNVMGLKAVHLGKVNGTNP
CVKSNGGCSHLCLNRPGNKYVCACQIGYELTKDKKTCVVPDAFMLFARKENIGRISIENA
NNDNIIPLTGVKDASALDFNIADNRIYWTDVKLKTITRAFINGSDIERVVDLGLETPEGL
AIDWIAHNLYWSDTGTRRIEMVRLEGCSRKVLIWSNIFEPRCLALDPSRGHIYWTEWGNS
GSIERSYLDGTHREIILSNIRKANGLTIDHSARKLYWADLYTPAIDSFDLLTRKRVAIIT
ENIVYPFSITQYQDYIYWTDWNTGDIEKANKTTGLSRVKIHNKLESVTDLLVFHASRQAG
WNPCALKNGNCTHLCIALPGDNESMSNSFKCGCPTHYILSEDNKTCIAPKNFMMYSLRNA
MFRFLPDTNDCPDVVLRIQGLKHVRSIEFDPITQHIYWIDGRTLSIRRTLENKTHSSIMI
SGNSGHPVDLALDSLGRLLFWSCAINDAINVTKLDNGSALGVVVKGDGEKPRNIAIHSEK
RLLFWTDIGRKMRVMRSKMDGKERIVVATDLEQPTSIAVDAISSIVYWAHGNQIECADFD
GNNRRILVSPVGQGSTVYLSIFFDFIYWFDRETSSLERINKSGNGRKTIMNKVLTDLIAI
NTPQDDVMKTHICSPFREYGGCSHFCIGITSSRCSCPKSLVLSEDEKTCRAAPACGTDHF
TCAAPSSAVTKDCIPATWKCDGQTDCPDGSDELGCPACSREQFKCQSGHCIDMSWVCDGT
AQCHDGLDEAHCCRPGQFQCIGSGVCISGSALCDGWDDCADGSDELASACTPANNPRQEN
NSLESGKITYVIIVPIGLIATIATIAFGFYYCRRKFINNEELPDILHDSAGDPLSPKPVR
LAKPMFAQKNCRKDLKIGMETVRMSMLNGSSIGSSYDRSHITGASSSTRGSSTGGYPQET
LNPPPSPATTANSTRCSSSNASRYKPYRHYRSINQPPPPTPCSTDVCDESDSNYPARYRY
ESEPYPPPPTPRSVYQSDAAISCPPSPSSRSSTYFSPLPPPPSPVP
NT seq
4821 nt
NT seq
+upstream
nt +downstream
nt
atggctattatcagtttaataattattctgattgcatgctttttcaaacttgtcctcctc
tctaatggatcgccaactcttctctttgtcacacaaaaagatattagaatggccaatgcc
tctcgtactaataaagtaactactattataaaagatctgtctgaaggtgcagcattagat
ttttattttgaacatgaactagtgtgttggtctgatagtggtttagaaataattcagtgc
attcaaacaaatggcactcatactggcgaaaaaacgattgtagtaaattccagtttaatt
tctcctgatggtttagcttgtgactggtacacaggaaaattatattggacagatggagaa
aagaataggatagaagtaaccagtattgatggacgtcacagaaaagtccttttttggaca
gacatttatcagccaagagctattgctcttgtaccaatgaaaagtatattattttggact
gattggggtgatgtacctaaaatagaaagagctgcaatgaatggagatccatcaacaaga
gaagtgataatttctgatgatatattttggccgaacggtttaacagtggattatgaaaat
gaattggtttattgggtagatggaagacttaaatttattgcagtgatggattattatgga
aaaaatagaagaaaagtcatagaaaaagggttagattatccgtttgcagtgacatttttc
gatcacaaattatattggactgattggaaaacatggtgtgtacattcatacgatgttcgt
caaactcaagcacttcctagagaattgttacatggagaatatatacctggtgacatagaa
gtttgggatgttagaagacaaccatatgggagccatccttgtgagagaaataatggaaat
tgttcacatttgtgtctcttaagtatgacagaacctggatatagctgtgcatgtcctaca
ggtgtgaaattagtggataatttgacttgtgcacaaggaccagaagaattgttattaata
gttcaaagaaatgaaatctgtcggatttctttagattcaccagattatactaattttgta
ttaccattaacaggaattaaacatgcgatagcaatagattttgatcctgtgcaagaaatg
ctttactggacagatgaagaagctcgtgcaattcgtagagcttcacttgatggttccaat
caagaaaatattataataacagaagtggaaaatcctgatggaatagctgttgactggtta
gcacggaatctttattggactgacacgggaacagatcgaattgaagtagcccggttaaat
ggtacaagtagaaaagtattaataaatgaagatttaattgaacccagagcaattgcttta
gctccagaattaggatggatgttttggacagattggaatgaaaaacgtccaaaaatagag
cgaagtaatctggatggcacagaacgtattcttttagtaaataaggatattgtttggcca
aatggaattgctctagatcttgcacgatggaaaatatattggtgcgatgcaaaaacagat
aagattgaagtgtgtaacatggatggtacagatagaagagaagtaattacagataatctt
ccacatctttttggattaagtttattaggagattatctgtattggactgactggcaaaga
cgaagtgtggatagagcacataaactcacaggtggtgaaagagaagttattgttgatcaa
gttccaaatgtcatgggtttaaaagcagtgcatttaggaaaagttaatggtacaaatcct
tgcgtaaaaagtaatggtggttgtagtcatttgtgtttaaatcgaccaggaaataagtat
gtgtgcgcatgtcaaattggatatgagttaactaaagataaaaagacttgtgttgtgcca
gatgcatttatgttatttgctaggaaagaaaatattggaagaattagcattgaaaatgca
aataatgataatattattccattaactggagttaaagatgcaagcgccttggactttaat
atagcagacaatcgtatttattggacggatgttaaattaaaaacaatcacaagagctttt
ataaatggatctgacatagaaagagtcgttgatcttggtttagaaacacctgaaggttta
gcaattgattggattgctcataatttatactggagtgatacaggaacacgaagaatagaa
atggttcgattagaaggttgtagtagaaaagtcctcatttggagtaacatttttgaacct
agatgtttagctcttgatcctagcagaggccatatatattggacagaatggggaaattct
ggaagtatagaaagatcatatttagatggcacgcatcgtgaaataatactttccaatatt
agaaaagcaaacggtctaacaattgaccattcagcacgaaaattatattgggcagattta
tatactccagctattgatagctttgatctgcttacaagaaaaagagtagcaattataaca
gaaaatattgtatatccatttagtattactcagtatcaagattacatttattggacagat
tggaatacaggtgacatagagaaagctaataagactactggattaagcagagtgaagata
cataataagttagaatctgtaacagatttattggttttccatgcttctagacaagcagga
tggaatccctgtgcattaaaaaatggcaactgcactcatctttgtatcgctttacccgga
gataatgaaagcatgtcaaattctttcaaatgtggttgtcctactcattacattttatca
gaggataataaaacttgcattgcaccaaaaaactttatgatgtatagtttacgcaatgca
atgtttcgctttcttcctgatacaaatgattgtccagatgtagttctccgaatacaaggt
ttgaagcatgtacgatctatagaatttgatcctataactcaacacatttattggatagat
ggacgaactttgtctattaggagaactttggaaaataaaacacattccagtataatgatt
tctggaaattctggacatccagtggatcttgctttagattcactgggaaggttgctattc
tggtcatgtgccataaatgatgcgatcaatgttacaaaacttgacaatggttccgctcta
ggtgttgtagtcaaaggtgatggagagaaaccaagaaatattgcgatacattcagaaaaa
agattacttttttggacagatattggaagaaaaatgagagtaatgcgcagtaaaatggat
ggaaaagagagaattgtagtagcgactgatctagaacaaccaacaagtattgcagtagat
gcaatctcaagcattgtatattgggcacatggaaatcagattgaatgtgcggattttgat
gggaacaatagaagaattctggtttctcccgttggacaaggctcaactgtttatttgtct
atcttttttgattttatttattggtttgatagggaaacatcaagtttagaacgtattaat
aaatctggaaatggaagaaaaacaatcatgaataaagtacttacagatttaattgcaata
aatactccacaagatgatgtaatgaaaacacatatttgtagtccttttcgggagtatgga
ggatgttcacatttttgtataggaatcacttcttctagatgttcttgtccaaaatctttg
gttttatctgaagatgaaaaaacttgtagagctgcgccagcctgtggaacggatcatttt
acttgtgctgcacctagttctgcagtaacaaaagattgtatacctgctacatggaaatgc
gatggccaaaccgactgtcctgatggaagtgatgaattaggttgtccagcttgtagtcgt
gaacaatttaaatgtcaaagtggccattgcattgacatgtcctgggtgtgcgatggaaca
gctcaatgccatgatggcctagacgaagctcattgttgccgtccaggtcaatttcagtgt
attggaagtggtgtttgtatttctggttcagcgctttgtgatggttgggacgactgtgcc
gacggaagcgatgaactggcatctgcatgcacacctgcaaacaatcctcgacaagaaaat
aattcattagaatctggaaaaatcacttatgttattattgtacctattggactgattgca
acaattgctacaattgctttcggattttattattgtagaagaaaattcataaacaatgaa
gaattgcctgatattttacatgattcagctggagatccattatcacccaaaccagtaaga
ttagcaaaaccaatgttcgcgcaaaaaaattgtaggaaagatttgaaaattggaatggaa
actgtaagaatgtcaatgttaaatggaagcagtataggatcaagttacgaccgcagccat
ataaccggagcttccagttcaactcgaggtagttccacaggaggttacccacaagaaaca
ttgaatcctcctccgagtccagcaacaacagccaattctactagatgctcaagcagtaat
gcatctaggtataaaccttataggcattataggagcataaatcagcctccacctccaact
ccttgcagtacagatgtttgcgacgaatcagacagcaattacccagcaagatacagatat
gaaagtgaaccctatcctccacctcctactccaagatctgtttaccaaagtgatgctgca
attagttgtcctccctctcctagttcacgatcttctacgtattttagtccacttcctcca
cctccttcccctgttccttga
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integrated database retrieval system
