Bombus affinis (rusty patched bumble bee): 126926549
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Entry
126926549 CDS
T09368
Name
(RefSeq) cleavage stimulation factor subunit 1
KO
K14406
cleavage stimulation factor subunit 1
Organism
baff
Bombus affinis (rusty patched bumble bee)
Pathway
baff03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
126926549
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
baff03019
]
126926549
Messenger RNA biogenesis [BR:
baff03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
126926549
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
CSTF1_dimer
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
Beta-prop_TEP1_2nd
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_SCAP
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_TEP1_C
Beta-prop_DCAF4
Ge1_WD40
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_EIPR1
NBCH_WD40
Beta-prop_HPS5
Beta-prop_NUP159_NUP214
Beta-prop_Vps41
Beta-prop_NOL10_N
Beta-prop_VPS8
Beta-prop_WDR75_2nd
Beta-prop_IFT140_2nd
PROPPIN
Beta-prop_NWD2_C
Beta-prop_WDR35_TULP_N
Cytochrom_D1
Beta-prop_WDR19_2nd
Beta-prop_LRRK2
Motif
Other DBs
NCBI-GeneID:
126926549
NCBI-ProteinID:
XP_050598860
LinkDB
All DBs
Position
18:4525623..4527695
Genome browser
AA seq
436 aa
AA seq
DB search
MKEPEVDPKNIIKSRELLYRLMISQLFYDGHQTLAVQLSNIIQAEPPCPPSDRLLHLMLI
GLAHEPDRSKKDTSNLSSFTSTFDNTLGPGLDLEFETEAQTQAPEPAQYETAYVTSHKGN
CRAGAFSADGQLIATGSVDASIKILDVDRMLAKSAPDEMAPGDQTGGHPVIRTLYDHLEE
VTCLEFHPREPILVSGSRDFSIKLFDFSKASVKKAFRTITDADQIRCLSFHPTGDFLVVG
TNHPVVRLYDVNTAQCFVCSIPNHQHTAGITSIKYSPDAKTYASAGKDGSIKLWDGVSNR
CINTFVKAHDGYEVCSVTFTRNGKYLLSSGKDSLIKLWELSTSRCLIAYTGAGTTGKQEH
KAQAIFNHTEDYVMFPDEATTSLCAWNSRNASRKQLLSLGHNGPVRLIVHSPTAPAFLTC
SDDFRARFWFRRMPTH
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaaccagaagtggacccgaaaaatattataaaaagcagagaactcctttacagg
cttatgatcagccaattgttctatgatggacaccagacattggcagtacagctgtcaaat
ataattcaagcagaacctccatgccctccatccgatcgtttacttcatttaatgttgatt
ggtctagctcatgaacctgatcgttctaaaaaggacacgagtaacttatcttctttcaca
tcgacttttgataacactttgggacctggtctagatttagaatttgaaacagaagctcaa
acccaagcaccagaacctgcacaatatgagactgcctatgtaacttcccacaaaggaaat
tgcagagctggagcattttctgcagatggtcagttaatagcaactggatcagtcgacgca
tcaattaaaattttagacgtggacagaatgctagctaagtctgcaccagatgaaatggca
cctggtgatcaaacaggtggtcatccagttataaggacattgtatgatcatttagaagaa
gtgacatgtctggaatttcacccaagagaacctattcttgtatctgggagcagagacttt
tctattaagctgtttgatttcagcaaagccagtgttaaaaaggcattcagaactattaca
gacgcagatcagatacgatgtttatcttttcatcctactggtgattttttggttgttgga
accaatcatccagtagtcaggttatacgacgttaatacagcacagtgctttgtttgtagc
ataccaaatcatcaacatactgctggaataactagtattaagtattctcccgatgcaaaa
acttatgcatcggctggtaaagatggaagtatcaaattatgggatggtgtatcaaaccga
tgtataaatacttttgtaaaagcgcatgatggctatgaagtatgttcagtgacttttaca
agaaatggaaagtatttactgtcatcagggaaagattctttgataaaattatgggaactg
tctactagcagatgtctaatagcatatacaggtgctggaactacaggcaagcaagaacat
aaagctcaagctatttttaatcacactgaagactatgtaatgtttcccgatgaagcgacg
acatcattatgtgcatggaattctcgaaatgcatctaggaaacaattactatcattagga
cataatggtccagtaagattgattgtccattctccaaccgctccagcattcttaacgtgc
agtgatgattttagagcaagattttggttcagaagaatgcccactcattag
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