Bombus affinis (rusty patched bumble bee): 126928865
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Entry
126928865 CDS
T09368
Name
(RefSeq) general transcription factor IIF subunit 1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
baff
Bombus affinis (rusty patched bumble bee)
Pathway
baff03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
126928865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
baff03021
]
126928865
Transcription machinery [BR:
baff03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
126928865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
126928865
NCBI-ProteinID:
XP_050600663
LinkDB
All DBs
Position
2:complement(1904960..1907981)
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AA seq
533 aa
AA seq
DB search
MTSSAVPKVSLVPSIQEFSIRVPKNNKKKHNVMRFNATLNVDFSKWTQVKMERENNMKEY
KGIEEEIPKFGAGSEFGRDAREEARRKKFGITSRKYKPEDQPWILKSGGKTGKKFKGIRE
GGVSENAAYYVFTHAADGAIEAFPLHEWYNFQPIQRYKALSAEEAEQEFSRRNKVMNYFS
LMLRKRLRNDEEGADDEEMLEGGKGKKPSKKEKDLKISEMDEWMNSDDDDSASDDEENKK
NSDEEDDSKKKKKGKVAVKKKKKKNASDDEAFEESDDGDEEGRECDYISDSSDSESELEQ
QKEIKSVAEEDALRKLLASDEDDDDEEQADKKDGEEEKDEDDEHKDKDDKDKDKTNKDAD
KKKDKKKKKKQSKKKDVKKLASGKDSSSDFSSDSDSGSDTIKEKDNKKSNSAHSSRSATP
IPAAMLDNLKRKQSGSPDLSQAKKLKLDNFNLVPVNSYIPGVSESGITEDAVRRYLMRKP
MTTTELLQKFKSKKTGLTSEQLVNVMTQILKKINPTKQTIKNKMYLSIKTQSN
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgacatcgtctgcggttccaaaggtttcacttgtgccttccatacaggaattcagtatc
agagtaccaaaaaataacaagaaaaagcacaatgtgatgcgttttaatgccacattaaat
gttgatttttcaaaatggactcaagtgaaaatggaacgtgaaaataatatgaaggaatac
aaaggaatagaagaggaaataccaaaatttggagctggctctgaatttggacgagatgcg
agagaagaagcaagaagaaaaaaatttggcattacaagtagaaaatataaaccagaagat
caaccttggattttaaaatctggaggaaaaactgggaaaaagtttaaaggtataagggaa
ggtggtgtgagtgaaaatgctgcatattatgtttttacacatgctgctgatggagctata
gaagcatttccattgcacgaatggtataattttcaaccaattcaaaggtacaaagcattg
agcgcagaagaagcagagcaggagtttagtcgtagaaataaagtaatgaattatttttca
ttgatgttgcgtaaaagacttaggaatgatgaggagggtgcagatgatgaggaaatgtta
gaaggtggaaaagggaaaaagccaagtaaaaaggagaaagatttaaaaatatctgaaatg
gatgagtggatgaatagcgatgatgatgattcagctagtgatgacgaggaaaataaaaaa
aattccgatgaagaagatgacagtaagaaaaaaaagaaaggcaaagttgctgtcaagaaa
aagaagaagaaaaacgcttctgatgatgaagcatttgaagaaagtgacgatggggatgaa
gaaggtagagaatgtgattatatttctgactcgtccgattctgaatcagaattggaacaa
caaaaagaaattaagtcggttgcggaagaagatgcattgagaaaattacttgcttctgat
gaagatgacgatgacgaagaacaggcagataaaaaggatggtgaagaagaaaaagacgaa
gatgacgaacataaggataaagatgataaggataaagataagaccaataaagatgcagat
aagaaaaaagataaaaagaaaaagaagaaacaatctaagaaaaaggatgtaaaaaagctt
gcgtcaggaaaagattcttctagtgacttttccagtgattcagattcaggatctgataca
ataaaggaaaaagataataaaaaatctaatagtgctcatagttcaagatctgcaactcct
ataccagccgcgatgttagataatttaaaaagaaaacaatctggatctccagatttatcg
caagcaaaaaaattgaaattggataatttcaatttagtaccagtaaattcttacattcca
ggagtcagtgaatccggcatcacagaagatgcagtaaggcgttatcttatgcgtaaacca
atgacaacaacggaacttttacaaaagtttaaatcgaagaaaactggtcttacttcggaa
caattagttaatgtgatgactcaaatactgaaaaagataaatccaactaagcagacaata
aaaaacaaaatgtatttatctattaaaacacaatctaattga
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