Bombus affinis (rusty patched bumble bee): 126928942
Help
Entry
126928942 CDS
T09368
Name
(RefSeq) pinin isoform X1
KO
K13114
pinin
Organism
baff
Bombus affinis (rusty patched bumble bee)
Pathway
baff03013
Nucleocytoplasmic transport
baff03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
126928942
03015 mRNA surveillance pathway
126928942
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
baff03019
]
126928942
03041 Spliceosome [BR:
baff03041
]
126928942
Messenger RNA biogenesis [BR:
baff03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
126928942
Spliceosome [BR:
baff03041
]
Complex C
Other components
EJC/TREX
126928942
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_memA
Pinin_SDK_N
Motif
Other DBs
NCBI-GeneID:
126928942
NCBI-ProteinID:
XP_050600829
LinkDB
All DBs
Position
2:11840684..11844302
Genome browser
AA seq
378 aa
AA seq
DB search
MRKLDTQEAWGAERLEAQLEAARDGLRGLDRSIRKILGRDLPDGENGPLQPPPRLSQKRP
LQEDRRRVVSDFVNNELPGGKRRWQGSNGEPKTVFSRLSARVPSNNDDSADEDDNVIKPA
VSSRVIATPREIPSRQEVIRRERIDERSRQRNKRMFGALLGTLQKFRQEETKLKAKEDKK
AEVEARVEEARRREKEELRRERQQLFLSRKRQLAEVRALEAKLARSRQFQDWRAAQLPLA
SFIKTRAQPPIYYVPKRKHPQTDILLTQSAKELHEEIERREKALVEELELIEVQVGLGKH
QQNFDGSATLNTTAEVPQSTEEGEENRDPNPEKNLESENNEPADVSMKSDKDENYENTND
IEKKEEVKVDEAKDENNG
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaattagatacacaagaggcctggggtgccgaaaggttagaagcgcaattagaa
gccgctcgagatggtcttcggggactcgatcgaagtattcgaaaaattttgggccgggat
ctgcctgatggagaaaacggaccgttacaaccaccacccagattatcacaaaagagacca
ttgcaagaggatagaaggcgtgttgtttctgattttgtcaacaatgaactacctggtgga
aaaaggagatggcaaggttcaaatggtgaaccaaaaacagttttcagtcggttaagtgca
cgtgttccttctaataatgacgatagtgctgatgaagatgataatgttattaagccagca
gtgtcttcgagagtgatagcaacaccgagagagattccatctagacaggaagttattaga
cgggaaagaatagatgaacgtagcaggcaaaggaataaacgaatgtttggtgccctttta
ggaacattacagaaatttcggcaagaagaaactaaactgaaagcaaaggaagataaaaaa
gcagaagtagaggcaagagtagaagaagccagaagaagagaaaaggaagaattacgacga
gaaagacaacaattattcttatcgcgtaaacggcaactagcagaagtccgagcactagag
gcaaaattggcgcgcagccgacaatttcaagattggcgcgcggcgcaattaccacttgct
tcgtttataaaaacgcgtgcccaacctcctatttattacgtaccaaagcgtaaacatcca
caaactgatattctattaacgcaatctgcgaaagaacttcatgaggagatcgaaagaagg
gagaaggcattggtcgaagagctggaacttatagaagtgcaagtaggtcttgggaaacat
caacaaaattttgatggatccgcaacattaaatacaacagcggaagttccacagtcgacg
gaagaaggagaagaaaatcgcgatccaaatccagagaagaacttagaatcagagaataac
gaaccggctgatgtttccatgaaatccgacaaggatgaaaattacgaaaacacgaatgat
attgaaaagaaggaggaagtaaaggtagatgaagcaaaagatgaaaataatggctag
DBGET
integrated database retrieval system
