Bombus affinis (rusty patched bumble bee): 126928999
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Entry
126928999 CDS
T09368
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4
KO
K10615
E3 ubiquitin-protein ligase HERC4 [EC:
2.3.2.26
]
Organism
baff
Bombus affinis (rusty patched bumble bee)
Pathway
baff04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
baff00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
126928999
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
baff04121
]
126928999
Enzymes [BR:
baff01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
126928999
Ubiquitin system [BR:
baff04121
]
Ubiquitin ligases (E3)
HECT type E3
126928999
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
126928999
NCBI-ProteinID:
XP_050600905
LinkDB
All DBs
Position
2:complement(3404726..3411244)
Genome browser
AA seq
1088 aa
AA seq
DB search
MYNIIKANWNKKRRLACEPVIEVQKSLLKKEDMFCWGNTRHGELGLGGIEDEIILVPCEV
DFKKASEIQQIACGENYTVVITHDGKIYSCGNNDYGQLGHEQGRKRLQLILGLDAFVFKK
AACGAYHTIAVNEWGQLFSWGSNSEGQLGLNSKNFMECSPRMVKTLGTSIIVQIACGMKH
ALALTNNGELYSWGSNSEGQLGLGVDIRYEMKPKLINTLAGVPIAFIACGGYHSIAISKS
GAIFGWGKNTFGQLGLNDTQNRNLPYQLQTLRNAKVCYAACGEEFSVFLTVDGGVFTCGA
GMYGQLGHGSNNNEILPRQVMELMGSTVTQISCGKRHTLALVPSQGRVYAWGLGGAGQLG
NNSTRSTTTPQVVRGPWVAPNGSSMMDFDKQFSSCTVGYVVKHIFTGGDHCFATVVTQND
NIKPDDCRTLESSSQILTITEEQLMTCQRVPPNSSVDHELMTYLETVFKSLSCVNGSFLF
KNDARYGCSSKHHGVDLDQATKLFGIIRELDNSTIQEVIFTCISESLIPSFVNLPPKIIS
PEFLRIYLILPLYHGFVNPLNCNLLHKPFCKAILESRPEVLEIVKNWWLEAPSHYFERLV
RVHKSVVLHYVKQSNPNKGILWDATLQDILDSLGLLHKLNNEDSEGNKVPYSTFHLPELV
ELIDIRADYIKWISEKESFSHRKVFCHYPFLLDANAKIILLETDQAIQMQSAMNEAATRA
VMNQIFLDPFSVDPRHHNQFIILNVSRENIVADTLRELAQYNSSDLKKPLRVKFHGEEAE
DAGGVRKEFFMLLLREILDPKYGMFKQYEETRVIWFSEDSFEDENMYFLIGILCGLVIYN
FIIIDLPFPLALYKKLLHEPVALNDIKDMSPVFAKSMQNILDYEEADFEEVFGLHFEVVR
EVFGEKKIYELTPNGSKVPVTLKNKKQFVDLYVDYTLNTSVEPHFNAFYKGFHKVCGGRV
LELFHSYELMAVVVGNEDYDWEELERNASYKEGYTKDDPTIVLFWQVFRELTLEEKKKFL
LFLTGSDRIPIQGMRAIRITIQPMNDERLLPVAHTCFNLLDLPRYQTRERLRYKLLQAIQ
QTHGFSLV
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atgtataatattataaaagcaaattggaataaaaaacgacgtttggcctgtgagcctgtt
atagaagtgcaaaaatctctacttaaaaaggaagatatgttttgttggggtaatactaga
catggagaattaggtttaggtggtatagaggatgaaattattttagttccatgtgaagtt
gattttaaaaaagcttcagaaattcagcaaattgcttgtggtgaaaattatacagtggtt
attactcatgatggcaaaatatattcatgtggaaataatgactatggacaacttggtcat
gaacaaggaaggaaaagattacaattaatacttggattagatgcatttgtatttaaaaaa
gcagcttgtggagcatatcataccatagcagtaaacgaatggggtcaattgtttagttgg
ggatctaattcagaaggtcaactaggtttaaattctaaaaattttatggaatgttcacca
cgtatggtaaagactctaggtacaagtattatagtacaaatagcttgtggtatgaaacat
gctcttgcattaacaaataatggagaattatacagctggggttctaatagtgaagggcaa
cttggtttaggtgttgatattagatatgaaatgaaacctaaacttatcaatactttagct
ggtgttcctattgcttttattgcctgtggaggatatcatagcatagctatatcaaaatca
ggagctatatttggatgggggaaaaatacatttgggcagttagggctaaatgatacacaa
aatagaaatttaccatatcaattgcaaacattacgaaatgcaaaagtatgttatgcagct
tgcggagaagaattttctgtatttttgacagttgatggtggagtatttacatgtggtgca
ggaatgtatggtcaattaggacatgggagtaataataatgaaattttacctcgtcaagtt
atggaacttatgggtagtacagttacacagatctcatgtggcaaaagacataccttggca
ttggtaccatcacaaggtagagtttatgcatggggcttgggtggtgcaggccagttaggt
aacaattctactcgaagcacaacaactccacaagtagtacgtggtccatgggttgcacca
aatggctcttcgatgatggacttcgataagcaattcagttcttgtacagttggctatgtc
gttaaacatattttcactggtggagatcattgttttgctacagtagttacacaaaatgat
aatataaaaccagatgactgtagaacattggaaagctcctctcaaattcttacaataact
gaagaacaattaatgacatgtcaacgagttccaccaaattcatctgttgatcatgaactt
atgacatatttagaaacggtatttaaaagtctatcctgtgtaaatggatcattcttattt
aaaaacgatgctcgttatggatgttcaagtaagcatcatggagtggatcttgatcaagca
actaaattattcggaattattagagaattggataatagcacaattcaagaagtaatattt
acttgtatatcagaaagtttgattccttcctttgttaacttaccacctaaaataatttct
ccagaatttttaagaatctatttaatattacctctgtatcatggtttcgtaaatccactt
aattgtaatttattacataagccattctgcaaagctattttagaatcacgtccagaagtt
cttgaaattgttaaaaattggtggcttgaagcaccgtctcattattttgagagattagtt
agagttcataagtcagttgttctgcattatgtaaaacaatctaacccaaataagggtata
ttatgggatgcaacgttgcaagatatattagattctttaggcttgctacataaattgaac
aatgaagattctgaaggcaataaagtaccttattctacatttcatttgccagaattagta
gagcttatagacataagggccgattacataaagtggatttcagaaaaagaatctttttca
catcggaaggtgttttgtcattatccattccttcttgacgcaaatgctaaaattatattg
cttgaaacggaccaagctattcagatgcaatcagcaatgaatgaggcagcaacccgagct
gtaatgaatcaaatatttcttgatccattttctgtagacccacgacatcataatcagttt
ataatattaaacgtttcacgggaaaatatagttgctgatactttacgagaattggcacaa
tataactctagtgacttaaaaaagcctcttcgagtaaaatttcatggcgaggaagcagaa
gatgcaggtggagttagaaaggagttttttatgttattactaagagaaattctagatccc
aaatatggcatgttcaaacaatatgaagaaactagagttatttggttcagtgaagattca
tttgaggatgaaaacatgtattttttaattggaatcctttgtggactagttatttataat
tttataattattgatttaccatttccattagctctatataagaaattgttacatgaacca
gttgccttaaatgatatcaaagatatgtcaccagtttttgccaagagtatgcaaaatata
cttgattacgaagaagcagattttgaagaagtctttggtttacacttcgaagtggtcagg
gaagtgtttggagaaaaaaagatatatgaacttacaccaaatggtagtaaagttcctgtt
acattgaaaaataagaaacaatttgttgacttatatgtagattatacattaaacacatct
gtggaacctcattttaatgctttttataaaggttttcataaagtttgtggcggtcgtgta
ttggaattatttcacagttacgaacttatggccgttgtagtaggaaatgaagattacgat
tgggaggaattagaaaggaatgcaagttataaagaaggatatacaaaagatgaccctacg
attgtgctattttggcaagtgtttcgcgaacttacattagaggaaaagaaaaagtttttg
ttatttttaacaggaagtgatagaatacctatacaaggcatgagagcgattaggattacg
atacaaccaatgaatgatgaacgtttactacccgttgctcatacatgtttcaatttactt
gatctaccacgatatcaaacccgagaaaggttacgatataaactattacaagcaattcag
caaacccatggcttttctttagtataa
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