Borreliella afzelii HLJ01: BafHLJ01_0251
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Entry
BafHLJ01_0251 CDS
T02298
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
bafh
Borreliella afzelii HLJ01
Pathway
bafh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bafh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BafHLJ01_0251 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bafh03021
]
BafHLJ01_0251 (rho)
03019 Messenger RNA biogenesis [BR:
bafh03019
]
BafHLJ01_0251 (rho)
Transcription machinery [BR:
bafh03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
BafHLJ01_0251 (rho)
Messenger RNA biogenesis [BR:
bafh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BafHLJ01_0251 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
NACHT
AAA
Spore_III_AA
DUF5091
AAA_22
DUF1269
AAA_25
NB-ARC
OB_RNB
Motif
Other DBs
NCBI-ProteinID:
AFU74513
LinkDB
All DBs
Position
complement(234258..235805)
Genome browser
AA seq
515 aa
AA seq
DB search
MDKKNVGFDLENEIRRLDVSKEFKIEDNLKKKVVKVVAKKDSTSNVTKSADLSGAKDSNG
VVFSEFDYDIPASGLENSIKTLEQSNIIKFFNGKDYVEIEKLYDKPITEVRKIVEGLGTN
HTIAVTMKKTELIFLLVKILSENDINVLFTGVLDVLSDGYGFLRTASNSYLSGGNDVYVS
PSQIRLFNLRTGDILYGQIRSPRDGERFFAMVKIKSINNQDPTFAQNRIPFDNLTPLYPN
IKLNLEYENCNISTRLINLFSPIGKGQRALIVSPPKAGKTTLLQKIANAITTNYSDVILM
ILLIDERPEEVTDMIRSVKGEVIASNFDEQASRHVQVAEMVIEKAKRLVENKKDVVILLD
SITRLARAYNQTMPTSGKILSGGVDSNALHKPKRFFGSARNIEEGGSLTIIATALVDTGS
KMDEVIFEEFKSTGNMELILDRSLADRRLFPAINIKKSGTRKEELLLSEEERSKILLIRR
ILGGVDDYEGVEVLIEKMKKSKNNEIFLKTMSNGN
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggacaaaaaaaatgttggatttgatttggaaaatgaaataaggcggttggatgtttct
aaagagtttaagattgaagataatttgaaaaaaaaagtggttaaagttgttgctaaaaag
gattctacatctaacgtgacaaaatctgcagatttaagtggtgcaaaagattcaaacggt
gtagtattttctgaatttgattatgatattcctgcttcaggtttagaaaatagtattaaa
actttagagcaaagtaatattattaagttttttaatggtaaagattatgtagagattgaa
aaactttatgacaagccaattacagaggttaggaaaattgttgaaggtcttgggaccaat
catactattgctgtaacaatgaaaaaaaccgaattaatatttttattggtgaaaatatta
agcgagaatgatattaatgttttatttacaggtgtacttgatgtacttagtgatggttat
gggtttttgagaactgcatcaaattcttatctttcaggaggtaatgatgtttacgtttct
ccttctcagattagactttttaatttaagaaccggggatattttatatggccaaattaga
tctcctagagatggtgagagattttttgctatggttaaaattaaatctattaataatcaa
gatcctacgtttgctcaaaacagaataccttttgataatttaactcctctttatcccaat
attaaattgaatcttgaatatgaaaattgcaatatttctacaagacttattaatcttttt
tcacctataggtaaaggacaaagggctttaatagtttctcctccaaaggcgggaaagacc
accttgcttcaaaaaatagctaacgcaataaccaccaattattcagatgttattttaatg
atattgcttattgatgagaggccagaagaagtaacagatatgattcgcagtgttaaaggt
gaagtgattgcatctaattttgatgagcaggctagtaggcatgttcaggtagcagagatg
gttattgaaaaggcaaaaagacttgttgaaaacaaaaaagatgttgttattttgcttgat
tctattacaaggcttgcgagggcatataatcaaactatgccaacttctggtaaaatttta
tcgggcggagtagattctaatgctcttcataagccaaagaggttttttggatctgctaga
aatattgaggaagggggaagtttgactattatagctactgctttggttgatactggcagt
aaaatggatgaagttatttttgaagaatttaaaagtaccggtaatatggaattaattctt
gatagaagtttggcggacagaagacttttccctgctattaatattaaaaagtcaggtacc
agaaaagaagagctactacttagtgaagaggaacgttctaagattttgcttattagaaga
atactcggaggtgttgatgattatgagggggttgaagttctgatagaaaagatgaaaaaa
agcaaaaataatgagatctttttaaagacaatgagcaatggcaattaa
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