Borreliella afzelii Tom3107: P612_01150
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Entry
P612_01150 CDS
T03256
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
baft
Borreliella afzelii Tom3107
Pathway
baft03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
baft00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
P612_01150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
baft03021
]
P612_01150
03019 Messenger RNA biogenesis [BR:
baft03019
]
P612_01150
Transcription machinery [BR:
baft03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
P612_01150
Messenger RNA biogenesis [BR:
baft03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
P612_01150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
NACHT
AAA
Spore_III_AA
DUF5091
AAA_22
DUF1269
AAA_25
OB_RNB
Motif
Other DBs
NCBI-ProteinID:
AIK18536
LinkDB
All DBs
Position
complement(234735..236282)
Genome browser
AA seq
515 aa
AA seq
DB search
MDKKNVGFDLENEIRRLDASKEFKIEDNLKKKVVKVVAKKDSTSNVTKSADLSGAKDSNG
VVFSEFDYDISASGLENSIKTLEQSNIIKFFNGKDYVEIEKLYDKPITEVRKIVEGLGTN
HTIAVTMKKTELIFLLVKILSENDINVLFTGVLDVLSDGYGFLRTASNSYLSGGNDVYVS
PSQIRLFNLRTGDILYGQIRSPRDGERFFAMVKIKSINNQDPTFAQNRIPFDNLTPLYPN
IKLNLEYENCNISTRLINLFSPIGKGQRALIVSPPKAGKTTLLQKIANAITTNYSDVILM
ILLIDERPEEVTDMIRSVKGEVIASNFDEQASRHVQVAEMVIEKAKRLVENKKDVVILLD
SITRLARAYNQTMPTSGKILSGGVDSNALHKPKRFFGSARNIEEGGSLTIIATALVDTGS
KMDEVIFEEFKSTGNMELILDRSLADRRLFPAINIKKSGTRKEELLLSEEERSKILLIRR
ILGGVDDYEGVEVLIEKMKKSKNNEIFLKTMSNGN
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggacaaaaaaaatgttggatttgatttggaaaatgaaataaggcggttggatgcttct
aaggagtttaagattgaagataatttgaaaaaaaaagtggttaaagttgttgctaaaaag
gattctacatctaacgtgacaaaatctgcagatttaagtggtgcaaaagattcaaacggt
gtagtattttctgaatttgattatgatatttctgcttcaggtttagaaaatagtattaaa
actttagagcaaagtaatattattaagttttttaatggtaaagattatgtagagattgaa
aaactttatgacaagccaattacagaggttaggaaaattgttgaaggtcttgggaccaat
catactattgctgtaacaatgaaaaaaaccgaattaatatttttattggtgaaaatatta
agcgagaatgatattaatgttttatttacaggtgtacttgatgtacttagtgatggttat
gggtttttgagaactgcatcaaattcttatctttcaggaggtaatgatgtttacgtttct
ccttctcagattagactttttaatttaagaaccggagatattttatatggccaaattaga
tcccctagagatggtgagagattttttgccatggttaaaattaaatctattaataatcaa
gatcctacgtttgctcaaaacagaataccttttgataatttaactcctctttatcccaat
attaaattgaatcttgaatatgaaaattgcaatatttctacaaggcttattaatcttttt
tcacctataggtaagggacaaagggctttaatagtttctcctccaaaggcgggaaagacc
accttgcttcaaaaaatagctaacgcaataaccaccaattattcggatgttattttaatg
atattgcttattgatgagaggccagaagaagtaacagatatgattcgcagtgttaaaggt
gaagtgattgcatctaattttgatgagcaggctagtaggcatgttcaggtagcagagatg
gttattgaaaaggcaaaaagacttgttgaaaacaaaaaagatgttgttattttgcttgat
tctattacaaggcttgcgagggcatataatcaaactatgccaacttctggtaaaatttta
tcgggcggagtagattctaatgctcttcataagccaaagaggttttttggatctgctaga
aatattgaggaagggggaagtttgactattatagctactgctttggttgatactggcagt
aaaatggatgaagttatttttgaagaatttaaaagtaccggtaatatggaattaattctt
gatagaagtttggcggacagaagacttttccctgctattaatattaaaaagtcaggtacc
agaaaagaagagctactacttagtgaagaggaacgttctaagattttgcttattagaaga
atactcggaggagttgatgattatgagggggttgaagttctgatagaaaagatgaaaaaa
agcaaaaataatgagatctttttaaagacaatgagtaatggcaattaa
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