Borrelia afzelii (Maryland): BafPKo_0463
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Entry
BafPKo_0463 CDS
T02093
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
bafz
Borrelia afzelii (Maryland)
Pathway
bafz02020
Two-component system
bafz02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bafz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BafPKo_0463 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BafPKo_0463 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bafz03021
]
BafPKo_0463 (rpoN)
Transcription machinery [BR:
bafz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BafPKo_0463 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
MarR
HTH_36
HTH_11
LacI
HTH_3
HTH_24
Motif
Other DBs
NCBI-ProteinID:
AEL69675
UniProt:
Q0SN59
LinkDB
All DBs
Position
complement(472421..473680)
Genome browser
AA seq
419 aa
AA seq
DB search
MIKQKLKLSQNLNSIQIQTIKLLSLNKKELTQLILEEIENNECLKIDSNKIFFETLKTYR
FKKVFYKEDNMIKNQHDIALEKTQTNISLKEHLLLQLRIQRINEDELKIGEILINNLNNK
GFHIINPYDLFKKEEKEKVKKIIELIQKFDPIGICVPNIIESLILQAKHHKLESNIIKIL
EKAELLEKTQEKLKEELKIRSKEFNTALEIIRQKLNPNPTFEFKDPEDTNFYVDPDILII
NHNNKFKIKIKEVNIFKKELKRTNENPQKQKKAKWLIESLRYRDEILAKIGIAIYTLQKE
FLRRGFKSLRPMNLSILSEKINVSKSTISRAIKNKYLKCEWGTILIKELFSSVGGAKTNE
FSKLSIKITVKKLLEVNKKMSDKAISAILKSKGISISRRTVNKYRNELKSEKGRIYYGT
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgattaaacaaaaattaaaattatctcaaaatttaaactcaattcaaatacaaacaata
aaattattaagtcttaataaaaaagaattaacacagcttatattagaagaaatcgaaaat
aacgaatgcctaaaaatagactcaaataaaatattttttgaaacattaaaaacatataga
tttaaaaaggttttttataaagaagataatatgataaaaaatcaacacgacatagcgctt
gaaaaaacacaaacaaacatttctttaaaagaacaccttttgctacaattaagaattcaa
agaataaacgaagatgaacttaaaataggtgaaatattaataaacaatctaaacaacaaa
ggctttcatataataaacccttacgatctttttaaaaaggaagaaaaagaaaaagtaaaa
aaaataattgaacttattcaaaaatttgatccaataggaatttgtgtccccaatataata
gaatcgttaattttacaagcaaagcatcataaattagaaagtaatattattaaaattctt
gaaaaagcagaacttcttgaaaaaactcaagaaaagttaaaagaagagctcaaaataaga
agtaaagaatttaacacagctttagaaattataagacaaaagctcaatcccaacccaaca
ttcgaatttaaagacccagaagacactaatttttatgttgatccagatatattaataata
aaccacaataacaaatttaagattaaaatcaaagaagttaacatctttaaaaaagaactt
aaaagaacaaatgaaaatcctcaaaaacaaaaaaaagcaaaatggttaatcgaatcattg
agatatagagacgaaatacttgcaaaaataggaatagctatatacacattgcaaaaagaa
tttttaagaagaggttttaaaagcttaagaccaatgaacttgagcattttgtcagaaaaa
atcaatgtatcaaaatcaacaatatcaagagcaataaaaaataaatatttaaaatgcgaa
tggggtaccatattaatcaaagagctctttagctctgttggtggagcaaaaacaaatgaa
ttttcaaaattaagcattaaaataacagtaaaaaagttgctagaagtaaataaaaagatg
tcagataaagcaatttctgctatactaaaatccaaaggaatctctatttctagaagaaca
gtaaacaagtatagaaatgaattaaaatctgagaaaggaagaatatattatggaacctaa
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