Borrelia afzelii (Maryland): BafPKo_0563
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Entry
BafPKo_0563 CDS
T02093
Symbol
polA
Name
(GenBank) DNA polymerase I family protein
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bafz
Borrelia afzelii (Maryland)
Pathway
bafz03030
DNA replication
bafz03410
Base excision repair
bafz03420
Nucleotide excision repair
bafz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bafz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BafPKo_0563 (polA)
03410 Base excision repair
BafPKo_0563 (polA)
03420 Nucleotide excision repair
BafPKo_0563 (polA)
03440 Homologous recombination
BafPKo_0563 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bafz03032
]
BafPKo_0563 (polA)
03400 DNA repair and recombination proteins [BR:
bafz03400
]
BafPKo_0563 (polA)
Enzymes [BR:
bafz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BafPKo_0563 (polA)
DNA replication proteins [BR:
bafz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BafPKo_0563 (polA)
DNA repair and recombination proteins [BR:
bafz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
BafPKo_0563 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BafPKo_0563 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
DNA_pol_A_exo1
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
AEL69768
UniProt:
Q0SMW1
LinkDB
All DBs
Position
complement(560351..563020)
Genome browser
AA seq
889 aa
AA seq
DB search
MKNYPLLNTRGENVNAFIGFFKTLFFIIKEKNPKHLIITFDSEIPTFRKQKYPNYKATRD
APPDDLIPQIGWIKEGLLKAKIPIFEIEGYEADDLLASFAKKAAKNNYLTYIISPDKDLL
QTMSEHIKILKIENNSFVEMDNEYVIKKFGINSFQIKDYLAIVGDRSDNIPGIKGIGPKG
AANLLREFKTLKGIYSNLELISKKHQEILIKEKENAFLSYDLVSLEEDLKIPEIENFSLK
NFSKELISLFEKHSAISLIKTYKKDILKQEEENVAQKSLFTQEPIADNLDTLNTIDTENV
KYHSITTKKELDNLIESLKKAKYISIDTETSSLDIYTARLIGISISFKEFEGYYIPIEAK
GKIYIEKHYIIQKFNNLFESNPKIIGQNYKFDYKILKNNGFSPIPPYFDTMIAAYLIDTN
SKVSLDFLAEKYLMHKNIKYEDVIQKNDNFANISLEMATSYSSEDADITFRLFNIFTKKL
KEDGLDKLMHEVEMPFNNVIIEMEENGIYLDREYLKEYGKELGQELELIENEIIKSIGIN
FNLNSPKQMHEILFEKLNLKLPEKMKKDSTDIKVLESLIGQHESIENIIKHRQIAKLKST
YTDNLIELINHKTNRLHTSFIQTKTATGRITSINPNLQNIPIKDEKGRKIRKAFKPENGN
IFISADYSQIELAILAHLSQDEALIKAFENNKDIHTETASKLFKIEEKEITPDLRRIAKS
INFGIIYRMSDFRLAKELGITKEEAKGFINSYFDSYPKIKEFITNQINFVRNTGYSETIL
KRRRYIKEINSNNYLERSAAERIAINSIIQGSAADIMKIAMVRVFNEFKSKKMESKILLQ
VHDEMLIESPIKEKNEVEKILKIMMETAYTLNLPLRANIETGKSWGEIH
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaattatccacttttaaacacacgaggagaaaatgtaaacgcatttatcggcttt
tttaaaacattatttttcataattaaagaaaaaaatcctaaacatttgattattaccttt
gactcagaaataccaacttttagaaaacaaaaatatccaaactacaaggcaacaagagat
gcacctccagatgatttaatccctcaaatcggatggataaaagaggggcttttaaaggca
aaaataccaatctttgaaattgagggctacgaagctgacgatcttttagctagtttcgcg
aaaaaagctgcaaagaacaactatttaacctacattatttctcctgacaaagacttgttg
caaacaatgtcagagcacataaagatacttaaaattgaaaacaacagctttgttgaaatg
gacaacgagtacgtaataaaaaaatttggaataaatagctttcaaataaaagattattta
gccattgttggagacagatctgataatatacctggaataaaaggcattggaccaaaagga
gcagcaaatttattaagagaatttaaaaccttaaaaggtatttattcaaatttagaacta
ataagtaaaaaacatcaagaaattttaatcaaagaaaaagaaaatgcttttttaagctat
gaccttgtaagtcttgaggaagatttaaaaattccagaaattgaaaacttctccttaaaa
aattttagcaaagagctaatatctttatttgaaaagcattcagcaatttctctaataaaa
acttataaaaaggatatcttaaaacaagaagaagaaaatgtagcccaaaaaagcctattc
acgcaagaacctatcgctgacaacttagataccctaaatacaattgacacagaaaatgtt
aaatatcattcaataacgaccaaaaaagaacttgacaatttaatagaaagccttaaaaag
gctaaatacatatcaatagacacagagacatcttcgcttgacatctacacagcaagatta
attggaatttctatttcattcaaagaatttgaaggatactatattccaatcgaagccaaa
ggaaaaatttacatagaaaaacattatataatacaaaaatttaacaatctatttgaatca
aatccaaaaataatcggtcaaaattataaatttgactataaaatactaaaaaataatgga
tttagccctataccaccttattttgatacaatgattgcagcatatcttattgacacaaac
tcaaaagtatcacttgattttcttgcagaaaaatatttaatgcataaaaatattaaatat
gaagatgtgatacaaaaaaatgataacttcgcaaatatatctctagaaatggcaacaagt
tattcatctgaagatgctgatattacatttagattattcaatatatttacaaaaaaatta
aaagaagacggactcgataagttgatgcacgaagtagaaatgccttttaacaatgtaatt
atagaaatggaagaaaatggcatttaccttgatagagaatatttaaaagaatatggaaaa
gaacttggacaagaattagaactaatcgaaaacgaaataataaaaagcataggaattaat
tttaatctaaattctccaaaacaaatgcacgaaattttatttgaaaaattaaatctaaaa
ttaccagagaaaatgaaaaaagattcaactgatataaaagtgcttgaatctctcatagga
cagcatgaatcgattgaaaacataataaagcacagacaaattgcaaaattgaagagtact
tacacagataatttgatagaactaataaaccataaaacaaacagactacatacaagcttt
atacaaacaaaaacagcaactggtagaatcaccagtataaatcccaacttacaaaacata
ccaataaaagatgagaaaggtcgaaaaataagaaaagcatttaaaccggaaaatggaaat
atttttatttcagctgattattctcagattgagctcgctatacttgctcatttatcacaa
gatgaagccctgattaaagcatttgaaaacaataaagacattcatacagaaactgcttct
aaacttttcaaaatagaggaaaaagaaattactccagacttgagaagaatagcaaaatct
attaatttcggaataatttatagaatgtcagattttagacttgcaaaagaactgggaatt
acaaaagaagaagcaaagggatttataaactcatactttgactcttatccaaagatcaaa
gaatttataacaaatcaaataaacttcgtaagaaatactggatatagcgaaaccatctta
aaacgaagaagatatataaaagaaattaatagtaataattatctagaaagatctgcagcc
gaaagaatagcaataaatagcataattcaagggagtgccgctgatattatgaaaattgca
atggtcagagtatttaatgaatttaaaagtaaaaaaatggaatcaaaaatattactgcag
gtacacgatgaaatgctcattgaatctcctattaaagagaaaaatgaagtggaaaaaata
ttaaaaattatgatggaaaccgcttacacattaaatctacctttaagagcaaatattgaa
acgggcaaatcatggggagaaattcattaa
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