Heyndrickxia coagulans 36D1: Bcoa_0008
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Entry
Bcoa_0008 CDS
T01628
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bag
Heyndrickxia coagulans 36D1
Pathway
bag03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bag00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Bcoa_0008
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bag03019
]
Bcoa_0008
03016 Transfer RNA biogenesis [BR:
bag03016
]
Bcoa_0008
Enzymes [BR:
bag01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Bcoa_0008
Messenger RNA biogenesis [BR:
bag03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Bcoa_0008
Transfer RNA biogenesis [BR:
bag03016
]
Prokaryotic type
tRNA degradation factors
Bcoa_0008
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
ATP-grasp
SPATA25
OB_RRP5_4th
S1_2
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
AEO99233
UniProt:
G2TJG2
LinkDB
All DBs
Position
complement(6463..8577)
Genome browser
AA seq
704 aa
AA seq
DB search
MVQDKHTYTIDWAGRPLTVEIGQLAKQANGAALVRYGETAVLSTATASKEPKNVDFFPLT
VNYEERLYAVGKIPGGFIKREGRPSEKAILSSRLIDRPIRPLFADGFRNEVQVVSMVMSV
DQDCTPEMAAMLGSSLALSVSDIPFEGPIAGVIVGRVDGKFLINPTVEQMEKSDIHLTVA
GTKDAINMVEAGAKEVPEEVMLEAIMFGHEEIKRLIAFQEKIVAEIGKEKMAVELFELDE
ELVEKVSGMCRKKMIEAIQVHEKKAREEAIRKVGDEVLAQFEAEEADEETVKQVKQILHD
IEKEEVRKLITVDKIRPDGRKIDEIRPLSSEVGVLPRTHGSGLFTRGQTQALSICTLGAL
GDVQILDGLGIEESKRFMHHYNFPSFSVGETGPMRGPGRREIGHGALGERALEPVIPDEK
EFPYTIRLVSEVLESNGSTSQASICASTLAMMDAGIPIKAPVAGIAMGLVKSGEHYTILT
DIQGMEDHLGDMDFKVAGTSKGVTALQMDIKIAGLSREILEEALQQARKGRMQILDHMMS
TISKTRDHLSVYAPKILTMTIHPDKIRDVIGPSGKQINKIIDETGVKIDIEQDGTIFISS
TDEEANNKAKKLIEDIVREVEVGKVYLGKVKRIEKFGAFVEIFNGKDGLVHISELAEERV
RKVEDVVKIGDEILVKVTDIDSHGRINLSRKAVLKEQQKKENKS
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atggtacaggataaacatacctatacgatagattgggccggccgcccgctcaccgtggag
atcggccagctcgcaaaacaggcaaacggtgctgcactcgtccgttacggcgaaacggct
gtcctcagtacagcaaccgcttctaaagaaccgaaaaatgtggacttttttccactgacc
gtaaattatgaggaacggctatatgctgtcgggaaaattccgggcggctttatcaaaaga
gaagggcgcccgagcgaaaaagccattttgtcaagtcggctgattgacaggccgatccgc
ccgctctttgccgacggcttccgcaatgaagtgcaggttgtcagtatggtcatgagcgtc
gaccaggactgcacgccggaaatggccgcgatgctcgggtcttcgctcgcactttccgtc
tccgatattccgtttgaaggcccgattgccggcgtcatcgtcggaagggtggacggcaag
ttcctcatcaacccgaccgtggaacagatggaaaaaagcgacatccatttaaccgttgcc
ggcacaaaagacgccattaatatggttgaagcgggtgcgaaagaagtgccggaagaagtg
atgcttgaagcgatcatgttcgggcatgaggaaatcaagcgcctgattgctttccaggaa
aaaattgtggcagaaatcggaaaagagaaaatggctgtcgaattgttcgaacttgacgaa
gaactggtggaaaaagtcagcggcatgtgccggaaaaaaatgattgaagccatccaggtt
catgagaagaaagcgcgcgaagaagcgatcagaaaagtgggcgatgaggtgcttgcccaa
tttgaagcagaagaagccgatgaagaaacggtcaagcaggttaaacaaattttgcacgat
attgaaaaagaagaagtccgcaagctgatcacggtcgataaaattcgcccggacggccgc
aaaatcgatgaaatccggccgctttcctccgaagtcggggttttgccgcgcacgcacggt
tccgggttgtttacccgcgggcaaacacaggctttaagcatttgtacgttaggcgcttta
ggcgacgtgcaaattttggacgggctcggcattgaagagtcaaaacggtttatgcaccat
tacaatttcccttcattcagcgtcggggaaaccgggccaatgagagggccgggccgccgc
gaaatcgggcacggggcactgggtgaacgtgcgctggaaccggtcattccggatgaaaaa
gaatttccgtacacgatccggcttgtatccgaggtgctcgaatcgaacggctccacttca
caggcaagcatttgcgcatccacccttgccatgatggatgccggcattccgattaaagcg
ccggttgctgggattgcgatggggcttgtgaaatccggcgaacattatacgattttaacc
gatatccagggcatggaagaccatctcggcgatatggactttaaagtggccggcacgtcg
aagggcgtcaccgcgctgcaaatggatattaaaattgcaggactgtcaagggagatactg
gaagaagcgttgcagcaggcgagaaagggcagaatgcagattctcgaccatatgatgtcg
acgatttcgaaaacacgtgaccatttgtccgtctatgcgccgaagattttaacgatgacc
attcatccggataaaatccgcgacgtcatcgggccaagcggtaaacaaatcaataaaatc
attgacgaaaccggcgtgaaaattgacattgaacaggatggcaccatctttatttcttcg
acggacgaagaggcaaacaacaaagcgaagaaattgattgaggatattgtccgggaagtc
gaagtcggcaaggtttatctcggtaaagtaaaacggatcgaaaaatttggcgcttttgtg
gaaatctttaacggcaaagacggccttgtccacatttccgaactcgccgaagaacgcgtc
cggaaagtcgaagatgttgtcaaaatcggcgatgaaattctggtcaaagtgacggatatt
gacagccacgggcgcatcaacctttcccgcaaagctgttttaaaggagcagcaaaaaaaa
gaaaataaatcgtga
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