Heyndrickxia coagulans 36D1: Bcoa_0067
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Entry
Bcoa_0067 CDS
T01628
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bag
Heyndrickxia coagulans 36D1
Brite
KEGG Orthology (KO) [BR:
bag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bag03032
]
Bcoa_0067
03400 DNA repair and recombination proteins [BR:
bag03400
]
Bcoa_0067
Enzymes [BR:
bag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Bcoa_0067
DNA replication proteins [BR:
bag03032
]
Prokaryotic type
DNA Topoisomerases
Bcoa_0067
DNA repair and recombination proteins [BR:
bag03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Bcoa_0067
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Zn_ribbon_RPB9
Auto_anti-p27
Zn_ribbon_IS1595
DUF7479
Motif
Other DBs
NCBI-ProteinID:
AEO99292
UniProt:
G2TJM1
LinkDB
All DBs
Position
complement(63801..65489)
Genome browser
AA seq
562 aa
AA seq
DB search
MDLVDAQQARRILDRLVGYNISPLLWKKVKKGLSAGRVQSVAVRLIIDRENEIKSFVPEE
YWTIAGSFKKGKDTFQASFYGVDGKKIQLKSEADVKKITGMLKSDKFQVSSVTHKEKKRN
PAPPFTTSSLQQEAARKLNFRAKKTMMVAQQLYEGIDLGKEGTVGLITYMRTDSTRISEV
AKTEANQYIREKFGENYLRQEERKEKKQANAQDAHEGIRPTSIFRDPGSVKSFLSRDQYK
LYKLIWERFMASQMAPAILDTMSATLANGTVLFRASGSKIQFPGFMKVYVEGSDDQQEEG
ERYLPHLEEGDVVQSESIEPKQHFTQPPPRYTEARLVKTLEELGIGRPSTYAPTLDTIQK
RGYVALENKRFVPTELGEIVLELIREFFPEIIDVEFTADMEKDLDEIEEGKVPWVQIIDA
FYQNFEARLKKAETEMEKIEIKDEETGEMCELCGSPMVYKMGRYGKFMACSNFPDCRNTK
PIVKKIGVTCPKCGKGEIIERKTKKNRIFYGCDRYPECDFVSWDKPVGRKCPKCGDMLVE
KKLKKGTQIQCVHCDYKEQSVK
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggaccttgtcgatgcccagcaggcaagacggattttggatcgtctcgtcggttataac
attagcccgcttttatggaagaaagtgaaaaaaggtttgagtgcgggcagggtacagtcc
gttgccgtccgccttatcatcgaccgggaaaatgaaattaaatcgtttgtgccggaagag
tactggacgattgccgggtcctttaaaaaagggaaagacacgttccaggcatctttttac
ggtgtggacggaaaaaaaatacagctgaagtcagaagcggatgtgaaaaaaattaccggc
atgctgaaaagcgacaagttccaggtttcttccgtcacgcacaaagagaagaaacggaat
ccggcgccgccgtttacgacttcttccttgcaacaggaagccgcccggaagctgaacttc
agggcaaagaaaacaatgatggtggcccagcagctgtatgaaggcatcgaccttggaaaa
gaagggactgtcgggctgatcacgtatatgagaacagactcgacccggatttcggaagtc
gcaaaaacagaagccaatcaatatattcgggaaaaattcggggaaaactatttgcgccag
gaagaaagaaaagagaaaaaacaggcaaatgcccaggatgcacacgaagggatccggcca
acaagcattttccgggatccgggttcggtcaagtcctttctaagcagagaccagtataag
ctgtacaaattgatttgggaacgctttatggccagccagatggcccctgcaatactggat
acgatgagtgccacgctggcaaacggcacggttttgttccgggcgtccgggtcaaaaatc
cagtttccgggttttatgaaagtgtatgtggaaggttccgacgaccagcaggaagaaggc
gaacgttatttgccgcatctcgaagaaggggatgttgtccaatctgagtcgatcgaaccg
aaacagcatttcacccagccgccgccacgctataccgaagcccggcttgtcaaaacgctg
gaagaacttggaattgggcggccgtccacctatgcgccgacattggatacaatccaaaag
cgcggctatgtggcgcttgagaataagcggtttgtcccgacagagctcggcgaaatcgtg
ctcgaattgattcgggaatttttcccggaaatcatagatgtcgaattcaccgctgatatg
gaaaaagacctggacgaaattgaagaaggaaaagtgccatgggtccaaatcattgatgcg
ttttatcaaaattttgaagcccgcctgaaaaaagcggaaaccgaaatggaaaaaatcgag
atcaaagatgaagaaaccggggaaatgtgcgagctgtgcggaagtccgatggtgtataaa
atggggcgttatggcaagtttatggcttgcagcaattttcctgattgccgcaatacgaag
ccaatcgtcaaaaaaatcggcgtcacttgcccgaaatgtggtaaaggtgaaatcattgag
cggaaaacaaagaaaaaccgcattttttacgggtgcgaccgttatccggaatgtgatttt
gtctcttgggataagccggttggcaggaagtgcccgaagtgcggcgacatgctcgttgaa
aaaaagctgaaaaaagggacgcagatccaatgtgtgcactgtgactataaagagcagtcg
gtgaagtaa
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