Heyndrickxia coagulans 36D1: Bcoa_0107
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Entry
Bcoa_0107 CDS
T01628
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
bag
Heyndrickxia coagulans 36D1
Pathway
bag03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Bcoa_0107
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bag03400
]
Bcoa_0107
Enzymes [BR:
bag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Bcoa_0107
DNA repair and recombination proteins [BR:
bag03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Bcoa_0107
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Zn_ribbon_PriA
Helicase_C
PIF1
Zn_ribbon_6
ATPase_2
AAA_19
ADDB_N
TrwB_AAD_bind
Zn_Ribbon_TF
HTH_11
AAA_30
T2SSE
Zn_ribbon_ISL3
Motif
Other DBs
NCBI-ProteinID:
AEO99332
UniProt:
G2TJR1
LinkDB
All DBs
Position
complement(102778..105183)
Genome browser
AA seq
801 aa
AA seq
DB search
MKIANVIVDIPAMQTDKYFDYRIPEKWETAIQPGMRVIVPFGPRTIQGFVAGIKDRSEVK
NLREIIAPQDLAPVLNAELLALGDWLAKETLCLKISAYQAMLPAAMKAKYEKRIKRQDGG
ANPFLDEVFKGHDEISWKEAQQKGFLPFLQKEAKNGSVEVVYEVKSKANKKTVRLIFCPL
SKDELEKRMEEVPKNAPKQKQVLQFFLENPDAKMASPELAETAGVSRAVIKTLLEKGWLE
EKQEESYRDPYAGRQFQKSVPHALTAEQKQAIGPVLSAVRENRNETFLLFGVTGSGKTEI
YLQSIQEVLNQGKEAIVLVPEISLTPQMVNRFKSRFGKDVAVLHSGLSVGEKYDEWRKIT
RKEAKVVVGARSAIFAPLENLGIIIIDEEHENSYKQEDNPRYHARDVALFRSKNHHCPVI
LGSATPSLESFARAQKGVYTLLKMGKRMNNHPLPEVSIVDMREELRAGNRSMFSRELFEK
LKDRLEKKQQTVLLLNKRGYSSFVMCRDCGYVQQCPNCDISLTYHRSTNEMKCHYCGYET
FVPATCPECGSSHIRYFGTGTQKVEEELGRLLPEARVIRMDVDTTGRKGAHERMLQSFAN
GEADILLGTQMIAKGLDFPNITLVGVLNADTMLHLPDFRASEKTFQLLTQVSGRAGRHQL
EGEVVVQTYTPEHYSIQFAGEQDYERFYRQEMRMRKVGAYPPFYYLTLITVSHENVMKAM
SAAEKIAGFMRNRVSGGSVILGPSACPVPRVKNRYRYQCLIKYKREPRLNETLSVLLEHF
QHQIASEGLSIAVDVNPNMMM
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgaagattgcaaatgtgattgtcgatataccggcaatgcagacagataaatattttgat
taccggatcccggaaaaatgggaaacggccatccagccgggaatgcgcgtcattgtcccg
tttggtccgcgcacgatccagggatttgttgcgggtataaaagaccgttcagaagtgaag
aacttgcgtgaaatcattgcgccgcaggatttggccccggttttgaatgcggagctgctt
gcgctcggggactggcttgcgaaggaaacgctttgcctgaaaatctccgcttaccaggcg
atgctgccggctgcgatgaaggcaaaatacgaaaaacgcatcaaaaggcaggacgggggc
gccaacccttttcttgacgaagtgtttaagggtcatgacgaaatcagctggaaagaagca
cagcaaaagggctttctgccgtttctgcaaaaagaagcgaaaaacggatcggtggaagtc
gtgtatgaagtcaaaagcaaagccaataagaaaacggtccggcttattttctgcccgctg
tccaaagacgagcttgaaaaacggatggaagaagtgccgaaaaatgcaccgaagcaaaag
caggtgctgcaatttttcctggaaaatccggatgctaagatggcttctcccgaactggcg
gaaacagctggcgtatcgcgggcggttatcaaaacattgcttgaaaaaggatggttggaa
gaaaaacaggaagaatcgtaccgcgacccgtatgccggccgccaatttcaaaagagcgtg
ccacatgctttgactgcggagcagaagcaggcaatcggcccggtcctttccgctgtccgc
gaaaacagaaatgaaacgtttttgctttttggcgtaacgggcagcggaaaaacggaaatt
tatctccagtcgatacaggaagtgctgaaccagggaaaagaggcgattgtccttgtgccg
gaaatttctcttacgccgcaaatggtgaaccgttttaaaagccgtttcggcaaagacgtg
gcggttttgcacagcggcttatcggtcggcgaaaaatacgatgaatggcggaaaattacc
cgcaaagaagcgaaagtggtcgtcggggcgcggtcggcgatttttgccccgcttgaaaat
cttggcatcattattattgatgaagaacatgaaaacagctacaaacaggaggacaacccg
cgctaccatgcgagggacgtcgcccttttccggagcaaaaaccaccattgcccggtcata
ctcggcagcgccaccccgtcgcttgaatcatttgcccgcgcgcaaaaaggggtctatact
ttgctgaaaatgggaaaacggatgaacaaccacccgcttcccgaggtttcgattgtcgat
atgcgcgaagaattgcgcgcaggcaaccgttccatgttctcaagagagctttttgaaaaa
ttgaaagaccgtctggagaaaaaacagcaaaccgtgctgctgctgaataaaaggggatac
tcctcctttgtcatgtgccgggactgcgggtatgtgcagcaatgtccgaactgtgatatc
tcgcttacctatcaccgctctacaaacgaaatgaaatgccattactgcggttacgagacg
tttgtgcccgcaacatgcccggaatgcgggagttcccatattcgttatttcgggacaggg
acgcagaaagtggaagaggaactggggcggctgttgcccgaagcgcgcgtgattcggatg
gatgtcgatacaaccggccgcaaaggggcacatgaacggatgcttcaaagctttgcaaac
ggggaagccgatattttgctcgggacgcagatgattgcaaaagggctcgatttcccaaat
attacgcttgtcggcgtactgaatgcggacacgatgctccatttacccgatttcagggcg
tctgaaaaaacgtttcagcttttaacacaagtaagcgggcgcgcggggcggcaccagctg
gaaggcgaggttgtggtccaaacctatacccccgaacattacagcatccaatttgcaggg
gaacaggactatgaacgcttttaccgccaggaaatgagaatgcggaaagtgggcgcctat
cctcctttttactatctcaccctgattacggtcagccatgaaaatgtgatgaaagccatg
tccgcggccgaaaaaatcgcaggctttatgcgaaaccgggtgtcgggcggaagtgtgatt
ttaggcccttcggcatgcccggtgccccgtgtgaaaaatagatatcgttaccaatgtctg
ataaaatacaaacgggaaccgcggctcaatgaaacattatctgttttgctggaacatttc
cagcaccagattgcctcggaaggattaagcatcgcggtcgatgtcaatcctaatatgatg
atgtaa
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