Heyndrickxia coagulans 36D1: Bcoa_0932
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Entry
Bcoa_0932 CDS
T01628
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bag
Heyndrickxia coagulans 36D1
Pathway
bag03420
Nucleotide excision repair
bag03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Bcoa_0932
03430 Mismatch repair
Bcoa_0932
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bag03400
]
Bcoa_0932
Enzymes [BR:
bag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Bcoa_0932
DNA repair and recombination proteins [BR:
bag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Bcoa_0932
MMR (mismatch excision repair)
Other MMR factors
Bcoa_0932
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C_2
Viral_helicase1
SLFN-g3_helicase
PhoH
DEAD
UvrD_C
AAA_16
AAA_30
AAA_11
nSTAND1
NACHT
ResIII
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
AEP00150
UniProt:
G2TR74
LinkDB
All DBs
Position
complement(1002216..1004507)
Genome browser
AA seq
763 aa
AA seq
DB search
MPHDEEWLKEQKRVDYTIEKMKQEKETLLSKVRAVRGEAQEIRNTFWEDVTVNLDEPDDV
VETSASVRQQAELLAERERSYGHMEKDVKKLDRLIYSPYFARVDFHEEGEPSEPIYIGIA
SYRDEDEYLVYDWRAPISSIYYDGVPGPVSYQAPDGRREGIMDLKRQFLIRRGHIEAMFD
TGISIGDEMLQEMLGANANTHMKNIVATIQKEQNRIIRDVSSNLLFVQGAAGSGKTSVAL
QRIAYLLYRYRDSLNSEQIVLFSPNQLFNHYVSKVLPELGENNMQQTTFLEFAQARAGKK
LKVESLLEQMEEALEGKAENRKEAQIKGSLAFFHAVRDYAEKLLNGGIIFRDIRFKGETI
IPKERISELFYAYDKSYSLPNRFQLVSKKLLKELEQIAKEERKKPWVEEEMELLGTEAYL
AAHQYAERKSRKNHDSFSESNYEKEFLARKIVNRRFSSIRKQIKTFHYLHIRAQYLDFLR
RAPEFVPGTEERLDVKTRAAFREGWLPYEDTVPFLYLFDLLTGKATSSSIKYVFIDEIQD
YSPVQLAYLRYLFPYSKFTMLGDLNQSIFGTSGRSQMELIKEIFGEEKAQVVYLTKSYRS
TAQITRFTKEILAGGEKIEWFEREGDLPVVTVARGKEEALAKVVRFAKKYAKDSNTVAII
GKSRKQCAEAYETLREELDLTFIEKEYSDLPEGIILIPSYLAKGLEFDSVIVLDASASVY
KDEAERTLLYTVGTRAMHHLALVSNGPVTPLLDKVPEALYVKE
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgccacatgatgaagaatggttaaaggaacaaaaacgcgttgattatacaattgaaaaa
atgaagcaggaaaaagaaacactgctttccaaagtaagggctgtccgcggcgaggcacag
gaaatccgcaatacgttctgggaagacgtaacggtgaacctcgatgagccggatgatgtc
gtggaaacatcggcgagcgtccgccagcaggcagaactgcttgctgaacgcgaacggagc
tacgggcatatggaaaaagacgtgaaaaaacttgaccgcctcatttattcgccgtatttt
gcccgcgtcgattttcatgaagaaggggaaccttccgagcccatctacatcggtattgct
tcctaccgggatgaggatgagtatctcgtgtacgattggcgtgcgccgatttccagtatt
tactatgacggggtgcccggcccggtttcgtaccaggcgccggacggcaggcgcgaaggc
atcatggatttgaaacggcagtttttaatccggcgcggccatattgaagcgatgtttgat
accgggatctcgatcggcgatgaaatgctgcaggaaatgcttggggcaaacgcaaacacc
catatgaaaaatattgtggcgacgattcagaaagagcagaaccggattatccgtgatgtt
tcaagcaatcttctgttcgtgcaaggggccgccggaagcggaaaaacatcggttgccctg
cagcggattgcgtatttgctgtaccggtaccgcgattcgctcaactccgagcaaattgtt
ttattttcgccgaaccagctgtttaatcattatgtgtcaaaagtgctcccggagctcggg
gaaaataatatgcagcagacgactttcctggagtttgcccaggcacgcgctggcaaaaag
ctaaaagtcgaaagcctgctcgagcaaatggaagaagcgctcgaaggcaaagccgaaaac
aggaaagaagcacaaatcaaaggcagccttgcctttttccatgccgttcgggattatgcg
gaaaaacttttaaacggcggcatcattttccgtgacattcgttttaaaggcgagacgatt
atcccgaaggaaagaatttctgagctgttttatgcctatgataaaagttactcgctgccg
aaccggtttcagcttgtcagcaaaaagctgctgaaagaactggaacagattgcaaaagaa
gagcggaaaaagccttgggtcgaagaagaaatggaactgctcgggacggaagcctatctt
gccgcccatcaatatgccgagcgcaaatcgcgcaagaaccatgattcgttcagcgagtcc
aattatgagaaagaatttctggcacgtaaaattgtcaaccgccgcttcagctcgatccga
aaacaaattaaaacgttccattatctccatatccgtgcccagtatcttgattttttacgg
cgcgcaccagaatttgttcccggtacggaagaacggcttgatgtaaaaacgcgcgccgct
ttccgtgaaggctggttgccctatgaagataccgtgccgtttttgtatctctttgacctt
ttgacaggcaaagctacgagcagttcgatcaaatatgtgtttattgatgaaatccaggat
tattcgccggtccagcttgcctatttgcgctatttgttcccgtacagcaagtttacgatg
ctcggtgacttgaaccagtccatattcggcacaagcggccgttcgcagatggagctgatt
aaggaaattttcggtgaagaaaaagcgcaggtcgtatacttgacgaaaagctaccgttcg
actgcccagatcacccgctttacgaaagaaattttagcgggcggggagaagattgaatgg
tttgaacgcgaaggcgatttgccggttgttacggtggcccgcggcaaggaagaagctttg
gcaaaagttgtacggtttgcgaaaaaatacgcaaaagatagcaataccgttgcgatcatc
ggcaagtcacggaaacagtgtgccgaagcgtatgaaacattgcgggaagaactggatctg
acctttattgaaaaagaatacagcgatcttccggaaggcatcatcctgatcccgtcttat
cttgcgaaggggctggaatttgacagcgtcatcgtgctcgatgcttccgcgtctgtgtat
aaagatgaagcagaacgcaccctgctatatacagtcggaacgcgggcaatgcaccacctc
gcccttgtcagcaacggtccggtgaccccgcttttagataaagtgcctgaggcgctatac
gttaaggaataa
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integrated database retrieval system
