Heyndrickxia coagulans 36D1: Bcoa_1133
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Entry
Bcoa_1133 CDS
T01628
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
bag
Heyndrickxia coagulans 36D1
Brite
KEGG Orthology (KO) [BR:
bag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bag03016
]
Bcoa_1133
Enzymes [BR:
bag01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Bcoa_1133
Transfer RNA biogenesis [BR:
bag03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Bcoa_1133
Prokaryotic type
Bcoa_1133
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF4026_N
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
AEP00347
UniProt:
G2TI72
LinkDB
All DBs
Position
complement(1235340..1236077)
Genome browser
AA seq
245 aa
AA seq
DB search
MKRVKCTVSYDGSRFAGYQVQPGQRTVQQEIEKALATLHKGRHVKTAASGRTDAGVHAMG
QVIHFDTDLSIPETSWPAALNSLLPGDISVSKAAYADPAFHARYSVKEKEYRYRIYFSHV
RSPFKHRYALRVWYSLDIEAMEAAAETVLGTHDFTSFCSAKTEVEDKIRTLKEIRFLQQD
DELVICFKGNGFLYNMVRILTGTLLEIGSGKRDPGEMREILEKRNRIYAGKTAPPEGLYL
WKVSY
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcgtaaaatgtacggtcagttacgatggttcccgattcgcggggtaccaggtc
cagccggggcagcggacggtccagcaggaaattgaaaaggcgctggccactcttcataaa
ggccgccacgtgaaaacggcggcttccggaaggacggatgccggcgtgcacgcgatgggg
caggtgatccatttcgatacggatctttctattccggaaacaagctggccggccgcttta
aacagcctgcttccaggcgatatttcggtctcgaaagcggcatatgcggaccctgctttt
cacgcccgctactcggtaaaagagaaggaataccgctaccggatctatttttctcatgtc
cgcagtccgtttaagcaccgttacgcgttaagggtctggtattcgcttgatatcgaggcg
atggaagcagcagctgagaccgtgctcggcacccatgattttacgagtttttgttcagcg
aaaacagaggtggaagacaagattcgtacgttaaaagagattcggtttttgcagcaggac
gatgaattggtgatctgttttaaaggaaacggttttttatacaatatggtacggatctta
accggcactttgcttgaaatcggcagcggcaaacgcgaccccggtgaaatgcgcgaaatc
cttgaaaaacggaaccggatttatgcgggcaaaactgcgccgccggaagggttgtattta
tggaaagtatcttattga
DBGET
integrated database retrieval system
