Heyndrickxia coagulans 36D1: Bcoa_1499
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Entry
Bcoa_1499 CDS
T01628
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bag
Heyndrickxia coagulans 36D1
Pathway
bag03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bag00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Bcoa_1499
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bag03019
]
Bcoa_1499
03009 Ribosome biogenesis [BR:
bag03009
]
Bcoa_1499
Enzymes [BR:
bag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Bcoa_1499
Messenger RNA biogenesis [BR:
bag03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Bcoa_1499
Ribosome biogenesis [BR:
bag03009
]
Prokaryotic type
rRNA helicases
Bcoa_1499
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
AEP00705
UniProt:
G2TIL4
LinkDB
All DBs
Position
1624789..1626216
Genome browser
AA seq
475 aa
AA seq
DB search
MTKFSELNLSPAILKAVKRMGFEEASPIQAATIPLTMQGKDIIGQAQTGTGKTAAFGIPL
IEKIDHRSRNIQGIIIAPTRELAIQVSEELYRIGQDSRVHVLAVYGGQDISRQIRALKNH
PQIIVGTPGRILDHIHRGTLKLDHVHTLVLDEADEMLNMGFIDDIEAILSTVPKDRQTML
FSATMPDPIRKIAERFMNNPELVRVKAKEMTVPSIEQYYVKVQEREKFDVLSRLLDVQSP
DLAIVFGRTKRRVDELANALNLRGYLAEGIHGDLSQAKRLSVLRKFKDGKIDVLVATDVA
ARGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGREGMAMTFVTPREMGYLKTVEQTTK
KRMLPMRPPTWDEAFEGQQRVTMERIGETIKEGNIDEYMSVAKELLAEYDPAEVTAAALK
LMTKEPDKTPVHISEERPLPHKKDHSRRGKPAGSYKGSYNKGRKPRRTTTNRKPF
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
ttgacgaagttttcagaattaaatttaagcccggcgattttaaaagctgtgaaaagaatg
ggatttgaagaggcatcgccgattcaggcagccaccattccgctcaccatgcaagggaag
gatattatcggccaggcgcagacaggtacgggaaaaactgcagcatttggcataccgtta
attgaaaagattgatcatagaagccgtaatattcaaggaatcattatcgcgccaacccgc
gagcttgccattcaggtatctgaagaattgtaccggatcggccaggattcgcgcgttcat
gtgctggctgtttatggcggccaggatatttcgcgtcagatccgtgcgctgaagaaccat
ccgcaaattattgtcggaacaccgggacggattcttgaccatatacaccggggaaccttg
aaactcgaccatgtgcatacgcttgtgcttgacgaagcggatgaaatgttgaatatgggc
tttattgatgacattgaagccattctttccaccgtgccgaaagaccgccaaacgatgctg
ttctcggcaaccatgccggatccgatccggaaaattgccgaacgcttcatgaacaacccg
gaacttgtccgtgtgaaagcaaaagaaatgaccgttccgtctattgaacaatactacgtc
aaagtccaggaacgcgaaaaattcgatgtattgtcaaggcttttggatgtacagtctccg
gaccttgcgattgtgtttgggcgcacgaagcggagagttgatgaactggcgaatgccctg
aacttgcgcggctatcttgcagaaggtatccacggtgatttgagccaggcgaaacgctta
tcggtactccggaagtttaaagacgggaaaattgatgtgcttgttgccaccgatgttgcc
gcacgcgggctggatatctcgggtgtaacccatgtttacaattacgatattccgcaggat
ccggaatcctatgtgcaccggatcggaagaacgggccgtgccggacgggaaggcatggca
atgacctttgtcacgccgcgggaaatgggctatctcaaaacggttgaacagacaacgaaa
aagagaatgctcccgatgcgcccgccgacctgggatgaagcgtttgaagggcagcagcgc
gtcaccatggaacggatcggggaaaccatcaaagaaggcaatattgatgaatatatgtcg
gtagcgaaggagctgcttgcagaatatgacccggctgaggtcacggcagctgctttgaaa
ctgatgacgaaagagccggataaaacaccggttcatatttcagaagaacggccgcttccg
cataaaaaagaccatagcagacggggcaagcctgcagggtcctacaaagggtcttacaat
aagggaagaaagccgagaagaacaacaacaaaccgcaaaccattttaa
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