Heyndrickxia coagulans 36D1: Bcoa_2436
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Entry
Bcoa_2436 CDS
T01628
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
bag
Heyndrickxia coagulans 36D1
Brite
KEGG Orthology (KO) [BR:
bag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bag03016
]
Bcoa_2436
Enzymes [BR:
bag01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
Bcoa_2436
Transfer RNA biogenesis [BR:
bag03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
Bcoa_2436
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
AEP01614
UniProt:
G2TNA5
LinkDB
All DBs
Position
2658309..2658878
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AA seq
189 aa
AA seq
DB search
MANHYFYAVLLPEAFKQKLQQATAGLKGSLPFKRWVHRDDLHITLAFLGAAEEAQLEKAN
RLIADQIGAFHVLPLVFDHFGTFGKKDEPRVLFAGIQESPPLSDLETMVAGCCLEAGFSL
DRRPFHPHMTLARKWDGDRPFADGMLDAFSPEPVPFSADRIVLYRTNLHQTPKYEIVQSF
RLADAQNLK
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaccattatttttatgccgtcttgctgccggaagcgttcaaacaaaaattgcag
caggcaacggccggcttgaaagggagcctgccgtttaagcgatgggtgcaccgcgatgat
cttcatattacccttgcctttttgggagcggcagaagaggcgcaattggaaaaagcgaac
cggctgattgcagatcaaatcggtgcattccacgtgctgccgcttgtgttcgaccacttc
ggtacttttgggaaaaaagacgaaccgcgtgtactctttgcaggcatacaggaatcaccg
ccgctttctgatcttgagacaatggtggccggctgctgccttgaagcaggtttttcactt
gatcgaagaccgtttcacccgcatatgacgctggcgcggaaatgggacggtgacagacct
tttgctgacggcatgctggatgcgttttcgcctgaaccggtgcctttttcggcagaccgg
atcgtgctctaccggacgaatctccatcaaacgccaaaatacgaaatcgtgcagtctttc
aggctagctgatgcacagaatttgaagtaa
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