Heyndrickxia coagulans 36D1: Bcoa_3109
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Entry
Bcoa_3109 CDS
T01628
Name
(GenBank) GAF modulated sigma54 specific transcriptional regulator, Fis family
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
bag
Heyndrickxia coagulans 36D1
Brite
KEGG Orthology (KO) [BR:
bag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bag03000
]
Bcoa_3109
Transcription factors [BR:
bag03000
]
Prokaryotic type
Helix-turn-helix
Other families
Bcoa_3109
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_lid_14
GAF
AAA_5
Mg_chelatase
AAA
AAA_2
HTH_50
AAA_19
HTH_23
HTH_30
HTH_28
Xre-like-HTH
AAA_16
AAA_3
AAA_22
bpMoxR
UBA
Motif
Other DBs
NCBI-ProteinID:
AEP02285
UniProt:
G2TPT9
LinkDB
All DBs
Position
complement(3313436..3315268)
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AA seq
610 aa
AA seq
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MAVCYWNTWKKFVQEGTLDPERINNRIAESWYRCKKRDVNPYLRKGQHILPVEKLLAHRE
RHKDFLNIAERHVKKMEPVFQEAGMMALLIDPCGHVLSVSGNRKTIFEAQKINFVEGVCW
TEERVGTNAIGTTLETGEAVMVNGPEHFSVASHQWSCAAAPVYDSQRNLVGVMDLTCPYT
ESHPFMLAMVSSLAYTVEQEIVRMAKSRHERFIQKAVELSDQYGDRLLVITDEEGKAVAA
SRPLRKKMPDYFGRTIEEMTSQTDTIVNQSIPLPSSREKIGTCFFLSENKNLSGTLLQKE
KFVFRGVTGISRSFQETLRKARIASLSDTTCFITGETGTGKELVARAIHENSSRKNGPFI
AVNCGAVPKELMESEFFGYADGAFTGAKRGGHKGKFEQAHGGTLFLDEVAELPSAMQTAL
LRVLQERKVVPVGSAKEVSVDVRIIAATHKDLPKLVKEGKFREDLFYRLYVFPVRLPALR
ERKEDLPALIQYISRKKNQDVEIPPAVMKKMQDYHWPGNIRELMNVIENVRLLAVAGEEE
AERYVDEYVSGETGLNGMEKQVTTLNPREAIERDMILEALKHTKGNAAAAAKMLDIPRST
FYRKLRKYGL
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggctgtatgttattggaatacgtggaaaaagtttgtgcaggaagggacattggatccc
gagagaatcaacaaccgaatcgctgaatcgtggtaccgctgtaaaaaacgggatgtgaac
ccgtatttgcggaaagggcagcatatcctgcctgttgaaaaactattggcacaccgggaa
aggcataaagattttttaaatattgccgaacgccatgtgaaaaagatggagcctgtgttt
caggaagccggcatgatggcgctcctgattgatccttgcgggcatgtgctgtccgtatca
ggaaaccggaaaaccatttttgaagcgcaaaaaattaattttgtcgaaggggtttgctgg
acggaagagcgggtcggcacgaatgcgatcggcactacgcttgagacaggggaagccgtg
atggtgaacggccctgagcatttttcggttgcctcccaccagtggagctgtgcagccgcg
ccggtttacgacagccaaaggaatcttgttggcgtcatggacttaacatgtccatatacc
gaatcccaccctttcatgctcgccatggtttcatcgctggcttatacagtagagcaggaa
atcgtacgcatggcaaaaagccggcatgaacgtttcatccaaaaagctgttgaactttcg
gaccagtacggggaccggttactcgtcattacggatgaagaaggaaaagccgttgcggca
agccggccgcttcggaagaaaatgccggattattttggtagaacgattgaagaaatgacc
tcccaaacggataccattgtgaaccaatccattccattgccttccagccgggaaaaaatc
ggcacctgtttctttttgtctgaaaataaaaatctttccggcacccttcttcaaaaagaa
aagttcgtcttccgtggcgtcaccggtataagtagaagttttcaggaaacgttgcgcaaa
gcccggattgcttccctttccgataccacttgttttatcacgggtgagaccggaactgga
aaggagctggtcgcacgagccatccatgaaaacagcagccggaaaaacggcccgtttatt
gccgtcaattgcggggctgtgccgaaagaattaatggaaagcgagtttttcggttatgcc
gacggggcttttaccggcgcaaaacggggtggccataaaggaaaattcgagcaggcccat
ggcggcaccttatttcttgacgaagtggccgagctgccgtctgccatgcaaacggcgttg
ctccgcgtcctgcaggaaagaaaagtcgtgccggtcggttctgcaaaagaagtaagtgtg
gacgtccggattattgccgcgacccacaaggatttaccgaagctcgtcaaagaagggaag
ttccgtgaagatttgttttaccgcctgtatgtttttcccgtccgccttcctgctttgcgc
gaaagaaaagaagacttgcctgctttgattcagtatatcagcagaaagaaaaatcaagac
gtcgaaatcccgccggcggttatgaagaaaatgcaggattatcattggcccggcaatatc
cgtgaactgatgaatgtgattgaaaacgtccgactgcttgctgtggccggtgaagaagaa
gcggaacggtatgtggacgaatatgtttccggagagaccgggcttaacggcatggaaaaa
caggtcacgacgctgaacccgcgggaagcgattgagcgcgatatgatactggaagctttg
aaacatacgaaaggaaatgcggcggcagcggcgaaaatgctggatattccgcgcagcaca
ttttacagaaaactgcggaaatacggcttgtaa
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