Buttiauxella agrestis: BADSM9389_08670
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Entry
BADSM9389_08670 CDS
T06676
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
bage
Buttiauxella agrestis
Pathway
bage03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bage00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BADSM9389_08670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bage03400
]
BADSM9389_08670
Enzymes [BR:
bage01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BADSM9389_08670
DNA repair and recombination proteins [BR:
bage03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BADSM9389_08670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
BCG08235
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All DBs
Position
932831..936205
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AA seq
1124 aa
AA seq
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MLRVYHSNRLDVLEAIMEFIVERQPLPDPFEPEVVLVQSTGMAQWLQMTLAQKFGIAANI
SFPLPASFIWDMFVRVLPNIPEQSAFNKQSMSWKLMTLIPTMLDQPEFALLNQYLAEDEN
GRKLSQLASRIADLYDQYLVYRPGWLSQWEKGELVDNVGEAQLWQAPLWAALVRHTQELG
QPEWHRANLYQRFINALESSNECPQGLPARVFICGISALPPVYLQALQALGKHIDVHLLF
TNPCRYYWGDIKDPAYLARLISRRRRSHGHEGITLPLFKDSDTASSLFNEDGEQDVGNPL
LASWGKLGRDYTFMLAEMQRFEEIDVFVDIEPDCLLRSLQYDLLELQNNAVTGLTQEEFE
HSHSKRILSLDDNSVAFHQCHSPQREVEVLHDQLLAMLDADPTLTPRDIIVMVADIDSYS
PFIQAVFGNAVAERRLPFAISDRRARQAHPALQAFISLLSLPDSRFAAQDVLALLEVPAL
AARFSINEEGLRYLRQWVNESGIRWGIDDDNVREWDLPATGQHTWRFGLTRMLLGYAMDS
QAGEWQSVLPYDESNGLIAELVGQLADLLMQLNKWRHELTVARPLAEWTSVCRDMLASFF
LPDTETEGALALIEQQWQEIIKYGLESCYQENVSLMLLRDELAQRLDQERISQRFLAGPI
NFCTLMPMRSIPFKVVCLLGMNDGVYPRTLAPLGFDLMSQKPQRGDRSRRDDDRYLFLEA
LNSAQARFYISYIGRSIQDNSQRYPSVLVDELLDYIAQSHCLEQDTEQTCDESSERVKRH
LVQLHHRTPFEAGNFVSGASAQSYAYEWLPAASEQGQAQAPFIQPLENKTHDVITLDQLQ
RFWRHPVRAFFQMRLGINFRLEETELPDAEPFTLDSLERFQMNQELLNTLVQEGDTQLLF
SRYRAAGILPFGAFGEILWETQLTEMEELAQKVRAERQNGTSQEVSLQIDGTSLEGWLSD
VQADGLLRWRPSILNSAHGLQLWIEHVVWCAMGGEGESRLYGRDSIEWKFPPMDVEQAKS
YLQQLIDGYRKGLVQPLLLLPISGGAWIKACYEPANDAILWDEQTQQKAKSKLLAAWEGN
QRVDGEGADMWLQRLYRTLEPDYYDAIISEAERYLLPLFRFNKA
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgtgtttaccattccaatcgactggatgtgctggaagcaattatggagtttatt
gtggaaaggcaaccgctgcccgacccttttgaacccgaggttgtactggtgcaaagtacc
ggtatggcgcaatggctgcaaatgacgctggcccaaaaatttggtatcgcggctaacatc
agtttcccacttccggcgagctttatctgggacatgtttgtgcgcgtactgccaaatatt
cctgagcagagtgctttcaacaagcaaagcatgagctggaagttaatgacgctcatcccg
acgatgctggatcagcctgaattcgctttgttaaaccaatatctggcagaagatgaaaat
ggccgaaaactctctcagttagcctcaagaattgcagacctttatgaccaatacctggtt
taccgcccaggttggttaagccagtgggagaaaggcgaactggttgataacgtgggcgag
gcccagttatggcaggctccgctgtgggccgctttggttcgccacacgcaagagcttggg
caacctgaatggcaccgtgcaaacctgtaccaacgttttattaacgctctggaatcaagt
aacgaatgcccgcaaggtttgcctgcccgagtctttatttgtggtatttcagctctgcct
ccggtttatcttcaggcattacaagcactgggtaagcatattgacgtgcatttgctgttt
accaacccgtgccgctactactggggtgatattaaagaccctgcttatcttgcgcgcttg
atcagccgccgccgccgtagccatgggcatgaaggtattactcttccgttatttaaagat
agcgacacggcgtcttcattgtttaatgaagacggtgagcaagatgttggcaacccgttg
ctggcctcgtggggaaaattaggacgcgattacacgttcatgcttgctgagatgcaacgc
tttgaagaaattgatgttttcgttgatatcgaaccagactgtttattgcgcagtttgcag
tacgatttacttgagctgcaaaacaatgcggtgacaggtttgacgcaggaagagttcgag
catagccacagcaaaagaatcctttcactggatgataattccgtcgctttccatcaatgc
catagccctcaacgtgaagtcgaagtgttgcacgaccagttgctggcgatgctggatgct
gacccaacccttaccccgcgcgatatcatcgtgatggtggcggatattgacagctacagt
ccgtttatccaggcggtatttggcaatgcagtagcggagcgtcggttaccatttgcgatt
tccgatcgccgggcaagacaagcgcacccggccctacaggcatttatctccctgctttca
cttcctgatagccgttttgctgcgcaggatgttttggcgttgcttgaagttcccgcactg
gctgctcgcttctcaatcaatgaggaagggctacgctatttgcgccagtgggtgaatgaa
tccggaattcgttggggtattgatgacgacaatgtccgtgaatgggatctcccggctacc
gggcagcatacctggcgctttggtttaacgcgcatgctgttaggttatgcaatggatagc
caggcaggtgaatggcagtcggttcttccatacgatgaatcaaacggtttaattgctgaa
ctggttgggcaactggcagatcttttaatgcagcttaataaatggcggcatgaacttacc
gttgcgcgtccgctggctgagtggacttccgtttgccgtgacatgctagccagcttcttc
ctgcctgataccgaaactgaaggcgcactggcgctgattgagcagcagtggcaagaaatc
attaaatacggtctggagtcgtgttatcaggaaaatgtttccctgatgctgttacgtgat
gaactggcacagcgcctcgaccaggagcgcatcagtcagcgcttcctggcagggccgata
aacttctgcaccttaatgcccatgcgttctatcccgttcaaagtggtttgtttgctgggg
atgaatgatggcgtttatccacgcacgctggctccgctcgggtttgatcttatgagccag
aagccgcagcgcggcgaccgtagccgccgtgacgatgaccgttacttgttcctcgaagcg
ctcaactctgcgcaagcgcgtttctatatcagttatatcgggcgttccattcaggacaac
agccagcgttatccctcagtgctggtagatgagttattagattacatcgcccaaagccat
tgcctggaacaggacacagaacaaacctgtgacgaaagcagcgagcgggtaaaaaggcat
ctggtgcaactgcatcaccgcactccatttgaagccggaaattttgtctctggcgcatct
gcgcaaagctatgcctatgaatggctgcctgccgcaagtgagcaagggcaagcacaagcc
ccgttcattcagccacttgaaaacaaaacacatgacgttatcacgttggatcaactgcaa
cgtttctggcgccatcctgtccgcgcttttttccagatgcgtctgggcattaacttccgt
cttgaagaaactgaactgcctgatgcggaacctttcaccttagatagccttgaacgtttc
cagatgaaccaggaattgctcaatacgctagttcaggaaggcgacacgcagctgctattc
agccgctatcgggctgcggggatattaccgtttggcgcattcggtgaaattttatgggaa
acccagttaacagaaatggaagaactggcgcaaaaagtgagagccgagcgacaaaatggc
accagccaggaagtctcgctccagatagacggaacaagtctggaaggttggttgtcggat
gtgcaggccgatggtttgctgcgctggcgaccgtcgatcctcaattcggcgcatggatta
caactgtggattgagcatgttgtgtggtgtgcaatgggaggagaaggagaaagtcgtctg
tatgggcgcgattctattgagtggaaattcccgccgatggatgttgaacaggcgaaaagc
tatctccagcaacttattgatggttatcggaaaggattagtacagccattgctattgcta
ccaataagtggaggggcatggataaaagcttgttacgaacccgcgaatgatgccatttta
tgggatgagcaaacgcaacagaaagccaaaagtaagctgttggcggcctgggaagggaat
cagcgagtcgacggggaaggggccgacatgtggctgcaacgcctgtatcgaacgctcgag
cctgactactacgacgcgataatcagtgaagctgagcgctatttactgcccctgtttcgc
ttcaataaagcttaa
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