Buttiauxella agrestis: BADSM9389_08690
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Entry
BADSM9389_08690 CDS
T06676
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
bage
Buttiauxella agrestis
Pathway
bage03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bage00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BADSM9389_08690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bage03400
]
BADSM9389_08690
Enzymes [BR:
bage01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BADSM9389_08690
DNA repair and recombination proteins [BR:
bage03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BADSM9389_08690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_11
AAA_25
EndoS_helical
Motif
Other DBs
NCBI-ProteinID:
BCG08237
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All DBs
Position
939278..942820
Genome browser
AA seq
1180 aa
AA seq
DB search
MTGTTQPLDPLSLPLTGERLIEASAGTGKTFTIAALYLRLLLGLGGKNAYPRPLSVEELL
VVTFTQAATEELRGRIRANIHELRIACVRNRTDNPLFQSLLAEIPDLHQAAQVLRLAEQQ
MDEAAIFTIHGFCQRMLSLNAFESGMLFEQQLIEDESLLRRHACADFWRRHCYPLPKPVA
QVMAEEWAGPEELLRDINSWLQGEQPILKQPPADDETLLARHQKIIESIENVKAQWCVSA
DDIAQILSVAKIDRRSYSSKNLPNWLNIVGVWAQTETTTYKLPDQLERFSQSMLDEKTKE
GQPPQHPVFRAINDLLGEPLTLRDLVIARAMAEIRYTVQQEKRRRGELGFDDMLTRLDEA
LHKPGGDALAAAIRSRFPAAMIDEFQDTDPQQYRIFRRLYINQPDTALLLIGDPKQAIYA
FRGADIFTYMKARHEVSAHYTLDTNWRSSPGMINSVNTLFQQLDNPFLFAQIPFLAVKAA
QKNNGLRFTLKGKNQAAMSFWAQSGDGCGVSDYQQTMAMQCAQQIREWLSAGQRGEALLW
KGEESRPVQSSDITILVRSRGEASIVREALSALNIPSVYLSNRDSVFATPESREILWILQ
AVLAPEIETALRSAVATSMLGLDARMIEALNNDENAWDCLVEEFSEYRQIWLRRGVMPML
RALIARRQVAENLLATPGGERRLTDILHISELLQEEAAQTDSEHALVRWLAQQVAEPDSN
AYSQQLRLESDRHLVQVVTIHKSKGLEYPLVWLPFIANYRAQNSGLYHDRSTFSPLLDLS
DDAESLSLAEEERLAEDLRLLYVALTRSIWHCSLGVAPLFKGNRAKKGNSDLHLGALGYL
LQKGEAKDAAGLQVCLQELASESISVEDPKSDDYTPWQPVSEALPELSARTMTRQVADNW
RVTSYSGLQQHGSSQALDLLPRLDVDAAGAAPTQSEPLLTPHTFPRGAGPGTFLHSLFEG
IDFTQPIDEAWIAKQLSEQGFGEQWQPIVTEWLCTILQAPLNDAGVSLSQLTPQDRQVEM
EFYLPIESDLQAAHLDALVREYDPLSKGCPPLNFKQVRGMLKGFIDLVFRWKGRYYLLDY
KSNWLGEDSSAYTGEAMAAAMQSHRYDLQYQLYTLALHRYLRHRIPDYDYQTHFGGVIYL
FLRGIESNGSSQGIFSTCPDEQLIAKMDALFAAQKDEVTP
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgaccggaaccacgcagcctcttgatccccttagcttgcctcttacgggggagcggctg
atagaagcctctgcggggaccggaaagacttttaccattgcggcactgtatttgcgtctg
ctgttaggcctgggaggtaaaaatgcttatcccaggccgctttctgtcgaagagttgctg
gtcgtaacctttacgcaggcggcgacggaagagcttcgtggccgtattcgagccaatatc
catgagctacgcatcgcatgcgtacgcaatcgtaccgacaatcctctgttccagagtctg
ctggccgaaattcctgacctgcatcaggcggcgcaggttctgcgtctggccgaacagcaa
atggatgaagcggcgatattcaccattcacggcttctgccaaagaatgctgagtctgaat
gcctttgaatcaggcatgttgtttgaacaacaactcatcgaagatgaatcactgttacgt
cgccatgcttgtgctgatttctggcgccgccattgttatccgttgcctaaacctgtcgcc
caggtgatggcagaagagtgggctggcccggaagaactactcagagatatcaatagctgg
ctgcaaggcgaacaacccattctgaaacagcctccagccgatgacgaaacgttgcttgcg
cgtcatcagaaaatcatcgaatccattgaaaacgtgaaagcgcaatggtgtgtcagtgca
gatgacatcgcgcagatcctgagtgtggcgaagattgaccgccgcagctatagcagtaaa
aacttaccgaactggctgaatattgttggtgtgtgggcgcagacagaaaccacgacctat
aaattacccgatcagctggagcgtttttctcagtcgatgcttgatgagaaaaccaaagaa
ggccaaccgccgcagcatcctgttttcagggcgattaacgatctgctgggcgaaccgctg
acgctgcgtgatttagtcattgcccgcgcgatggctgaaatccgctacaccgtgcagcag
gaaaaacgccgccgtggcgaactcgggtttgacgatatgttaacccgccttgatgaagcg
ttgcataaacccggcggggatgcgctggcagcggcgatccgcagccgtttcccggctgca
atgattgatgagtttcaggataccgacccgcagcaatatcgtattttcagacgtttgtat
atcaatcagcctgatactgcattgttgcttatcggtgacccaaaacaggcgatttacgct
ttccgtggcgcggatatttttacctacatgaaagcccggcatgaggtaagcgcccactac
acgctggacaccaactggcgttcatcaccggggatgataaacagcgtaaatacccttttc
cagcagttggataaccccttcttattcgcgcaaattccattcttagcggtgaaagccgcc
cagaagaacaatggcttacgttttaccctcaaagggaaaaaccaggcggcgatgtcgttt
tgggcgcaatcaggcgatggctgcggtgtgagtgattaccaacaaactatggccatgcag
tgcgcacaacaaattcgggaatggttgagtgccgggcagcgtggcgaagcattgctgtgg
aaaggggaagagtcacgcccggtacagtcgtctgacatcaccattctggttcgtagtcgc
ggcgaagcatcgattgtgcgtgaagcattgagcgccctgaatatcccttcggtttatctt
tcaaaccgtgactcagtattcgcaacgccggaatctcgagagattctgtggattttgcag
gcggtactggccccagaaatagaaacggcgctgcgtagcgccgtcgccactagcatgttg
gggctggatgcccgaatgatcgaagcgctgaacaatgacgaaaatgcctgggactgcctg
gttgaagagttttccgagtatcggcaaatttggttacgccgaggcgtgatgccgatgtta
cgcgcgcttatcgcacgacgtcaggttgccgaaaacttgctggcaacaccgggtggcgag
cggcgtctgaccgatattttgcatatcagcgagctgttgcaagaagaagccgcgcaaact
gacagtgaacatgcgctggtgcgctggctggctcagcaggttgcggaacctgacagtaac
gcctatagccaacaactgcgtctcgaaagcgatcgacacctggttcaggtggtcactatc
cataaatcaaaagggctggaatacccgctggtttggttgccattcatcgccaattatcgg
gcgcaaaacagcggcctgtaccatgaccgttccacgttttcacctttgctggatttaagt
gatgacgcggaaagcctgagtctggcagaagaagagcgcctggcggaagacttacggctg
ttgtacgtcgcgttgacgcgctcaatctggcattgcagtctcggcgtcgcaccgttgttt
aaaggtaatcgcgctaaaaaagggaacagcgatttgcacctcggggcgttgggttatctt
ttacaaaaaggcgaagcgaaagatgctgcgggattacaagtttgcttacaggaactggca
agcgagtcgattagcgtcgaagatcctaagtcagatgattacactccgtggcagccagtg
agtgaggcgttgcccgaacttagcgcacgtaccatgacaaggcaggtggctgataactgg
cgagtcaccagttattcaggtttacagcagcatggtagcagccaggctctggatttattg
ccgcgcctggatgtcgatgctgcaggtgctgcaccgactcaaagtgagccattacttact
ccgcacacctttccacgtggggctgggccgggcacatttttgcatagcttgttcgaaggc
attgattttactcagccaatagatgaagcgtggattgcaaagcagttaagcgagcaaggt
tttggtgagcagtggcagccgattgtcaccgagtggttgtgcactattttgcaggcaccg
ttgaatgacgcgggcgtgtcgcttagccagttaactccgcaagacaggcaggtcgaaatg
gagttctatttgccgatagagagtgatttgcaggcagcacatttagatgccctcgtgcgg
gaatatgacccgttatcaaaaggttgtccgccgttaaacttcaagcaagtgcgtggcatg
ctgaaagggtttattgacctggtgttccgctggaaggggcgctactacctgctggattac
aaatcgaactggctaggagaagacagcagcgcttacaccggggaagcgatggcggcggcg
atgcaatctcatcggtatgatctgcaatatcaactgtatacgctggctttgcaccgttat
ttacggcacagaattcctgattatgactaccagactcacttcggtggcgttatttatctc
tttttacgtggcatcgaaagtaatggctcctcacagggaatattttcaacgtgcccggat
gagcaactgattgcgaagatggacgcactatttgcggcgcaaaaggacgaggtgacgcca
tga
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