Buttiauxella agrestis: BADSM9389_08700
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Entry
BADSM9389_08700 CDS
T06676
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
bage
Buttiauxella agrestis
Pathway
bage03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bage00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BADSM9389_08700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bage03400
]
BADSM9389_08700
Enzymes [BR:
bage01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BADSM9389_08700
DNA repair and recombination proteins [BR:
bage03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BADSM9389_08700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
RecD_N
AAA_30
Helicase_RecD
UvrD_C_2
Viral_helicase1
AAA_11
AAA_22
SH3_13
UvrD-helicase
SLFN-g3_helicase
AAA_16
nSTAND3
PhoH
Herpes_Helicase
AAA_28
CbiA
MukB
T2SSE
AAA
ATPase
SRP54
UvrD_C
TrwB_AAD_bind
AAA_24
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
BCG08238
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Position
942817..944652
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AA seq
611 aa
AA seq
DB search
MKMSELLQQAVEQKLLRALDAQFAMMIASDDQPAVMLAAALVSHDAGEGHVCIPLSRLIP
EFCFSGRQPDLAAQLFALADLKSGWRETLLASNAVSEYEGATPLKLIGERLYLNRMWQNE
QSIAQFFVQENRPITLNESQVINVLNQLFEPLPETDWQKVAAAVALTRRISVISGGPGTG
KTTTVAKLLAALVQLSDAPSLRIQLAAPTGKAAARLTESLGSALRRLPLDEAQKSSLPND
ACTLHRLLGAQPNSQRLRYHAGNPLHLDVLVVDEASMVDLPMMAKLINAMPPHARVIFLG
DRDQLASVEAGAVLGDICHYVTHGYSPERAAELSLLTGYALTAGEGSGASALRDGLCLLQ
KSYRFDSKSGIGQLAFAVNASDVKRVKTVFSEGFSDITKQPLRETADYAMMIDDAVEGYR
PYLDLIRNQAEPASILEAFGRYQMLCALREGPFGVSGLNSRIELALIQKRLIERPNQATS
RWYNGRPIMVSRNDSSLGLFNGDIGIALDRGEGLRVWFPMPDGTIKSVQPSRLPGHDTAY
AMTVHKSQGSEFEHAALVLPNQYTAVVTRELVYTAITRARNKLSLYADDRVLEKAIVTRT
ERRSGLMESFS
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgtctgagcttttacagcaggcggttgagcaaaagttattgcgtgcgctggat
gcacagtttgccatgatgattgccagtgatgatcagcccgcggtgatgctggcggcggca
ttggtcagccacgatgcgggtgaagggcatgtctgcattccgctttcacgtttaatcccg
gagttctgtttttccgggcgtcagccagatttagcagcacaactttttgcgcttgccgac
ctgaaaagcggctggcgcgagacattgctggcttccaatgcagtgagtgaatacgaaggg
gcgaccccgctaaagctgattggcgagcgtttatatctcaaccgaatgtggcaaaacgag
cagtccattgcgcagttttttgtgcaggaaaatcggcccattacgcttaatgaatcgcag
gtcattaacgtactcaatcagctttttgagcctctgcccgagactgactggcaaaaagtg
gccgcagccgtggcattaacccgtcgtatatcggtgatttcaggtgggccgggtaccggt
aaaaccaccacggtggcgaaattgctcgccgcgttagtccagctttcggatgccccatct
ttgcggattcaactcgccgcgccgacggggaaagccgcagcccgcttaacggaatcgctg
ggttcggcgttgcgccgcttgccgttagatgaagcgcaaaaatcctcattacccaacgat
gcctgcacattgcaccgtttgttaggtgcgcaaccgaacagccagcgcctgcgctaccat
gccggaaaccctttgcaccttgatgtgctggtggtggatgaagcctcgatggtggatttg
ccgatgatggcaaaactgatcaatgcgatgcctcctcatgcgcgagtgattttcttaggc
gaccgcgatcagttggcgtcggttgaagcaggggccgtgctcggcgatatttgccactat
gtcacgcatgggtattcacctgagcgtgcagcagagctgagtctgctcaccggttatgcg
ctaactgcgggagaaggtagtggcgcgagcgcgttgcgtgatggcttgtgtttactgcaa
aaaagctatcgctttgacagtaaatccggcatcgggcaactggcatttgcggtcaatgcc
agcgatgttaaacgcgtcaaaaccgtatttagcgaaggttttagcgatattactaaacaa
ccactgcgtgaaacggcggactacgccatgatgattgacgatgcggtggaagggtatcga
ccatacctggacttgattcgcaatcaggcagagcccgcttctattcttgaagctttcggg
cgttatcaaatgctatgcgcattgcgtgaaggtccgtttggcgtcagcggtttgaatagc
cgcatcgagctggcactgattcaaaaacggttaattgagcggccaaatcaggcgacatcg
cgctggtataacggcaggccgattatggtttctcgtaacgacagttcgttggggctgttt
aacggggatatcggtatcgcgctggatagaggcgaagggttaagggtctggttcccgatg
ccggatggcaccattaaatccgtacagccaagtcgtttaccgggccacgatacggcatac
gccatgacggtgcataaatcgcagggttctgaatttgaacatgccgcgctggtgctgcca
aaccagtacaccgctgtggtgacgcgtgaactggtgtatacggcgattacccgcgctcga
aataagctgtcgctgtatgccgatgatcgggtgttagaaaaggcaattgtgaccaggact
gaacggcgtagcgggttgatggagagttttagctag
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