Buttiauxella agrestis: BADSM9389_09260
Help
Entry
BADSM9389_09260 CDS
T06676
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
bage
Buttiauxella agrestis
Brite
KEGG Orthology (KO) [BR:
bage00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bage03016
]
BADSM9389_09260
Enzymes [BR:
bage01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
BADSM9389_09260
Transfer RNA biogenesis [BR:
bage03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BADSM9389_09260
Prokaryotic type
BADSM9389_09260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
BCG08291
LinkDB
All DBs
Position
1002674..1003720
Genome browser
AA seq
348 aa
AA seq
DB search
MDMQNLTWLHGKPQGTGLIKASPEDFVVIEDLGFGPDGDGEQLLLRILKNGCNTRFVADA
LAKYLKVPAREVSFAGQKDKHAVTEQWFCVRLPGKEMPSMSAFQLEGCQVLEFARHRRKL
RLGALKGNNFTLVLRDVSDRAELEQRLNKILHQGVPNYFGSQRFGIAGNNLHQALRWAQS
NAPIRDRNKRSFYLSAARSAMFNQIVSERLKKPDFNQVIDGDALQLAGRGSWFVATPEEM
PELQNRVDAGELLITAPLPGDGAWGSQNAALAFEQECVAQETDLQSLLVRERVEAARRAM
LVMPKELSWAWWDDITVELKFWLPAGSFATSVVRELMNAPGGYADIAE
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggatatgcagaatctgacctggctgcacggcaagccacaaggcaccgggttaatcaaa
gccagtccagaggacttcgtggttatcgaagacctgggttttgggccggatggcgacggc
gaacaactcctgttacgcatcctgaaaaatggctgcaacacacgctttgttgctgatgcg
ctggcgaaatatctgaaggttcccgcccgtgaagtgagctttgccgggcagaaagacaag
catgcagtaaccgagcagtggttctgcgtacgtctgccgggcaaagaaatgccgagtatg
agcgcttttcaactcgaagggtgccaggtgctggaatttgcccgtcaccgccgtaaactg
cgcctcggtgctttgaaaggtaacaacttcacgctggtcctgcgcgacgtgagtgaccgc
gcggagcttgaacagcgcctgaataaaattctgcaccagggcgtgccgaactactttggc
agccagcgttttggtattgcgggtaataacctgcatcaggccctgcgttgggcgcaaagc
aatgcgccaatccgtgaccgcaataaacgcagtttttatctgtcagctgctcgtagcgcc
atgtttaaccagattgtcagcgaaaggctgaaaaagccggactttaaccaggttatcgat
ggcgacgctttgcagctcgccgggcgcgggagctggtttgtcgcaacgcctgaagagatg
cccgagctgcaaaaccgtgttgatgcgggtgaattgctgattaccgcgccattgccaggt
gatggagcctggggttcgcaaaacgcagcacttgcgtttgagcaagagtgtgtggcgcag
gaaactgatttacagtcactgttggtacgtgagcgtgtagaagcggcgcgtcgcgccatg
ttggtcatgccgaaagagttaagctgggcctggtgggatgatatcaccgttgagctgaaa
ttctggctgccagccgggagtttcgcgacaagcgtagtgcgtgaactaatgaacgcgccg
ggcggttatgctgatattgccgaatag
DBGET
integrated database retrieval system
