Buttiauxella agrestis: BADSM9389_15060
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Entry
BADSM9389_15060 CDS
T06676
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
bage
Buttiauxella agrestis
Pathway
bage00521
Streptomycin biosynthesis
bage00523
Polyketide sugar unit biosynthesis
bage00525
Acarbose and validamycin biosynthesis
bage00541
Biosynthesis of various nucleotide sugars
bage01100
Metabolic pathways
bage01110
Biosynthesis of secondary metabolites
bage01250
Biosynthesis of nucleotide sugars
Module
bage_M01025
dTDP-D-Fuc4NAc biosynthesis, Glc-1P => dTDP-D-Fuc4NAc
Brite
KEGG Orthology (KO) [BR:
bage00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
BADSM9389_15060 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
BADSM9389_15060 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
BADSM9389_15060 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
BADSM9389_15060 (rfbB)
00525 Acarbose and validamycin biosynthesis
BADSM9389_15060 (rfbB)
Enzymes [BR:
bage01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
BADSM9389_15060 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
Sacchrp_dh_NADP
KR
Motif
Other DBs
NCBI-ProteinID:
BCG08847
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All DBs
Position
1638509..1639573
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AA seq
354 aa
AA seq
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MKIIVTGGAGFIGSAVVRHIIEATNDEVMVVDKLTYAGNIESLAPVSNNERYSFRQIDIC
DRVALDSAFKEFQPDAVMHLAAESHVDRSIDGPAAFIETNIVGTYVLLEAARHYWSQLTS
SAKEHFRFHHISTDEVFGDLHDTESLFTETTPYAPSSPYSASKASSDHLVRAWSRTYGLP
TLVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPVYGNGCQIRDWLYVEDHARALYKVVT
EGQPGETYNIGGHNERKNIDVVRTICRLLDEIVAEKPSKIVRFEDLITYVTDRPGHDLRY
AIDASKIERELGWKPTETFESGIRKTVEWYLANESWWQRVRDGSYSRERLGLNS
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataatcgtcacaggcggagcaggctttattggttctgcagtcgttcgccacatt
atcgaagcaactaatgacgaagttatggtcgttgacaagctgacttatgctggcaatatt
gagtcacttgcccctgtttctaataacgagcgttattcattccgccagattgatatttgt
gaccgggtcgctttagatagtgcatttaaggagtttcaacccgatgcagtgatgcatctg
gcagcggaaagtcatgttgaccgttccattgacggccctgcggcatttattgaaacgaat
attgttggaacctatgtgttgctggaggccgcgcgacactactggagccagttaacgtca
tctgcaaaagagcatttccgcttccaccatatttcaactgatgaagtattcggcgatctg
cacgacacggaatcgttattcactgaaacaacaccctatgcaccaagtagcccttattcg
gcttcgaaagcgtcaagtgatcatctggtccgcgcctggtcgcgcacctatgggttacca
acccttgttaccaattgttcaaataactatggtccgtaccattttcccgagaaattgatc
ccattggttattctcaatgctcttgagggaaaaccgctgcctgtttatggcaatgggtgc
caaattcgtgattggttatatgttgaagatcatgccagagccctttacaaagttgttacc
gaaggccaaccaggtgaaacgtataatattggcgggcataacgagcgtaaaaatatcgat
gtcgttagaactatctgccgtttgcttgatgagatagttgccgaaaaaccttcgaaaatt
gtacgatttgaagacttgattacctatgttacagaccgtccaggccatgatctgcgctat
gctattgatgcttctaaaattgaacgggaactcggttggaaacccactgaaacctttgag
agtggtatccggaaaacggttgaatggtatctggcaaatgaatcatggtggcaacgtgtt
agagatggttcgtattcaagagaacgtttaggcctaaacagctaa
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