Buttiauxella agrestis: BADSM9389_18100
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Entry
BADSM9389_18100 CDS
T06676
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
bage
Buttiauxella agrestis
Brite
KEGG Orthology (KO) [BR:
bage00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bage03016
]
BADSM9389_18100
Enzymes [BR:
bage01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
BADSM9389_18100
Transfer RNA biogenesis [BR:
bage03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
BADSM9389_18100
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Motif
Other DBs
NCBI-ProteinID:
BCG09144
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Position
1942525..1943646
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AA seq
373 aa
AA seq
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MTYQMITTDEALVRVCEAARQFSAVALDTEFVRTRTYYPQLGLIQLYDSETASLIDPLTI
TDWSPFKALLQDTAVIKFLHAGSEDLEVFLNAFGMLPDPFIDTQILAAFSGRPLSCGFAT
IVESFTGIALDKSESRTDWIARPLTERQCEYAAADVLYLLPIAHKLMEETKAAGWMDAAL
DECNLMAARRQDVLDPEEAWREIGNAWQLRTRQLACLKKLASWRLRKARERDMAVNFVVR
EEHLWQVARYMPGSLGELEHLGLSGSEIRFHGKALLALVVEAQALSDEELPEPLSNLVDM
PGYRRVFKAIKALVQQVSETSGLSAELLASRRQINQLLNWHWKLKTQSTLPELIVGWRGR
LMGESLKTLLADF
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
ttgacttaccaaatgattactaccgatgaagcccttgtccgcgtttgcgaagcggctcgt
caattttcagccgtcgcgctggataccgaatttgtgcgcactcgcacctattacccgcaa
ctgggcttgattcagctttacgatagcgaaaccgcttcgcttatcgacccgctgacaatc
acagactggtcgccgttcaaagcgttgttgcaagacaccgcggtgattaaattcctgcat
gctggcagcgaagatctggaagtgttccttaatgcttttggtatgttgcccgatccattt
attgatacgcagattctggctgctttcagtggacgtccgctttcgtgcggttttgcgacc
atcgtcgaatcgtttaccggcattgcgctggataaaagcgaatctcgtaccgactggatt
gcgcgtccgctcactgaacgccagtgtgaatacgctgccgcagacgtgctctatttgctg
cctatcgcgcataaactgatggaagagacaaaagcggcgggttggatggatgctgcgctg
gacgagtgcaatttgatggctgcacgtcgtcaggatgttctggacccagaagaagcctgg
cgcgaaatcggcaatgcctggcagcttagaacgcgtcagttggcgtgcctgaagaaactg
gcatcctggcgtctgcgtaaagcgcgtgaacgcgatatggcggttaatttcgtggtgcgc
gaagaacatctctggcaggtcgcacgttatatgccgggttcattgggcgagcttgagcac
ctgggcctgagcggcagtgaaattcgtttccacggcaaagcgctgctggcattggtggtg
gaagcgcaggctctgtcggacgaggaattacccgagccgctaagcaatcttgttgatatg
ccgggttatcgtcgtgtctttaaagcgattaaagctctggtgcagcaggtgagtgaaacc
agcggcttaagtgctgaattactggcgtcgcgtagacaaattaatcagttgctaaactgg
cactggaaattaaaaacgcaatcaacgctaccagaattaatcgttggttggcgtggtcgt
cttatgggcgaatcgctaaaaacgttattggctgatttttaa
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