Buttiauxella agrestis: BADSM9389_20380
Help
Entry
BADSM9389_20380 CDS
T06676
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
bage
Buttiauxella agrestis
Brite
KEGG Orthology (KO) [BR:
bage00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bage03016
]
BADSM9389_20380
Enzymes [BR:
bage01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
BADSM9389_20380
Transfer RNA biogenesis [BR:
bage03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
BADSM9389_20380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
OSR1_C
ODP
PilZ
Motif
Other DBs
NCBI-ProteinID:
BCG09370
LinkDB
All DBs
Position
complement(2181257..2183191)
Genome browser
AA seq
644 aa
AA seq
DB search
MFQDNPLLAQLKQQLHSQTPRVEGVVKGTEKGFGFLEVDSQKSYFIPPPQMKKVMHGDRV
SAVIHTDKDRETAEPEELIEPFLSRFVGRVQRKDDRLTIVPDHPLLRDAIQCRADRNVTH
DFQNGDWAVAEMKRHPLKGDRGFYADLTQFITSGDDHLAPWWVTLSRHNLEREAPNGVAT
EMLDEGLVREDLTALDFVTIDSASTEDMDDALFVEELADGKLQLTVAIADPTAWIEEGSK
LDDIAKVRAFTNYLPGFNIPMLPRELSDDLCSLRPNVTRPVVACRMVIAQDGSIESEINF
FVATIESKAKLAYDDVSDWLEEKGDWQPSSDAIAKQIRLLERICLSRADWRRTHALVFKD
RPDYRFVLGEKGEVLDIVSEPRRIANRIVEESMIAANVCAAIVLREKLGFGVYNVHTGFD
PANIEQLATMLQGHGLEVNAQEVLTLNGFCKLRRELDAQPTGFLDSRIRRYQSFAEISTE
PGPHYGLGLEAYATWTSPIRKYGDMINHRLLKAIIKGETASRPQDEITVQMAERRRLNRM
AERDVGDWLYARFLKDKAGTESKFAAEIIDVSRGGMRVRLIDNGAVAFIPAPFIHSVRDE
MVCSQELGTVQIKGEVAYKVTDVIDVTIAEVRMETRSVIARPAA
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgttccaggataatccgctgctcgcgcagcttaaacagcaactgcattcccaaactcca
cgcgttgaaggcgtggttaaaggcacggaaaaaggctttggcttcctcgaagtggattcc
cagaaaagttactttattccgccaccgcagatgaaaaaagtgatgcacggtgaccgcgtg
agcgcggtgattcataccgacaaggaccgcgaaaccgctgagccagaagagcttatcgaa
ccgttcctcagccggtttgttggccgtgtgcaacgtaaagacgaccgtctgacaattgtt
ccggaccacccattactgcgcgatgcgattcagtgtcgagctgaccgtaacgtcacccat
gatttccagaatggtgactgggccgtcgctgagatgaagcgccatccgttgaaaggggat
cgcggtttctatgctgatttgactcaattcatcacttccggtgacgatcaccttgcacca
tggtgggtgacactgtcacgccacaatcttgagcgtgaagcgcctaatggcgtagcgact
gaaatgcttgacgaaggcctggtgcgtgaagatttaaccgccctcgattttgtcaccatt
gatagcgccagcaccgaagatatggatgatgcgctgtttgttgaagaacttgccgacggc
aaactgcaactgaccgtcgcgattgccgatccaaccgcctggattgaagaaggcagcaag
cttgacgatatcgcgaaagttcgcgccttcacaaactacctgccgggcttcaacatcccg
atgctgccacgcgaattgtcggacgatttatgttcgctgcgccctaatgtcacgcgccct
gttgtggcttgtcgcatggttatcgcgcaggacggtagcattgagagcgagattaacttc
ttcgtcgccaccatcgaatcaaaagccaaactggcatatgacgatgtgtccgactggtta
gaagaaaaaggcgactggcagccatcatctgacgccatagctaaacaaattcgcctgctc
gagcgtatttgcctgagccgtgctgactggcgccgcactcacgcgttggtgtttaaagac
cgcccagattaccgctttgtattaggcgagaaaggcgaagtgctggatatcgtttccgag
ccacgtcgtatcgctaaccgcatcgttgaagaatcaatgattgcggctaacgtctgtgcg
gcaatcgtgctacgtgaaaaacttggtttcggcgtttataacgtccacaccggttttgac
ccggcaaacatcgaacaactggccacgatgctgcaaggccatggacttgaagttaacgcg
caagaagtgctgacgcttaacggtttctgcaaactgcgccgtgaactcgatgcacagcca
accggattccttgatagccgtattcgtcgttatcagtcgtttgctgaaatcagcaccgag
ccgggtccgcattacggtttgggtcttgaagcttacgccacctggacttcaccgattcgt
aaatacggcgatatgattaaccatcgcctgcttaaagcgattatcaaaggtgaaacggca
tcacgtccacaagatgaaattacggtacaaatggcagaacgccgccgtctgaaccgtatg
gctgaacgtgatgttggcgactggctgtatgctcgcttcctgaaagataaagccggaaca
gagtccaaatttgctgctgaaattattgatgtcagccgtggcggaatgcgtgttcgcctg
attgataacggtgcggttgccttcatccctgccccatttattcactcagtgcgtgatgaa
atggtgtgcagccaggaattaggcactgtgcaaatcaagggcgaagtggcttacaaagtc
actgacgtaattgacgtcaccatcgcggaagttcgtatggaaacacgcagcgtgatagct
cgccccgctgcctga
DBGET
integrated database retrieval system
