Buttiauxella agrestis: BADSM9389_23480
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Entry
BADSM9389_23480 CDS
T06676
Symbol
nirD
Name
(GenBank) nitrite reductase (NAD(P)H) small subunit
KO
K00361
nitrite reductase [NAD(P)H] [EC:
1.7.1.4
]
Organism
bage
Buttiauxella agrestis
Pathway
bage00910
Nitrogen metabolism
bage01100
Metabolic pathways
bage01120
Microbial metabolism in diverse environments
Module
bage_M00531
Assimilatory nitrate reduction, nitrate => ammonia
bage_M00615
Nitrate assimilation
Brite
KEGG Orthology (KO) [BR:
bage00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
BADSM9389_23480 (nirD)
Enzymes [BR:
bage01000
]
1. Oxidoreductases
1.7 Acting on other nitrogenous compounds as donors
1.7.1 With NAD+ or NADP+ as acceptor
1.7.1.4 nitrite reductase [NAD(P)H]
BADSM9389_23480 (nirD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox
Rieske_2
Rubredoxin_C
NIR_SIR
Pyr_redox_3
Fer2_BFD
NIR_SIR_ferr
DAO
AlaDh_PNT_C
GIDA
Lys_Orn_oxgnase
FAD_oxidored
FAD_binding_3
3HCDH_N
NAD_binding_8
FAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
BCG09678
LinkDB
All DBs
Position
complement(2527687..2531754)
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AA seq
1355 aa
AA seq
DB search
MMRRLIVIGNGMSAIRLVEQIVAQAAGRFAITVFGEEPVLSYNRILLSPVLAGEKPAQAT
QLHDAAWYVSHGIEMLTGEAVLEVDTQRQTVRSDSRTLEYDELVFATGSYPFIPPIDGHQ
QPHVHGFRTLADVDAILGGEGHVVVLGGGLLGVEAAAALCARGISVTLIHRQPWLMDIQL
NLQAGALLAEHLAQRGICCQLNCGIKRITAQSVVLDTGEVIPAGRVIIATGVKPNIRLAQ
QAGIYCQRGITVDAQLRSTTPCVSALGECCEIDGQTWGLVAPCLQQADVLAARLCGSALN
DFHYQDRGTRLKVSGIPLFSAGDIRSQPDTRVLTAFDPITRHYRCLHLRDGKLVGALLMG
DITPANTLTDILLSAAPVTPDVLFDEYHSDEQPLAAGNDDMTKATLVVIGHGMVGHHFLE
QCVAQKLHHSHHIVVFGEERHPAYDRVHLSEYFAGRSAQSLSMVQGDFFAENGIELRCNS
KIVEIDRQQRVVRDHEGRETWFDKLVLATGSFPFVPPVPGNDLPGCFVYRTLDDLDAIAE
RARNATRGVVIGGGLLGLEAANALKQLGLETHVVEFAPNLMAVQLDNAGAAMLREKISDI
GVQVHTSKSTTAITDVDGLQLNFADGETLNTDLIVFSAGIRPQDALARSSELALGERGGI
VINDRCQTSDSAIYAIGECALWEGKIFGLVAPGYQMARVTAATLAGQESAFLGADMSTKL
KLLGVEVASFGDAHGRTPGCQSYQWTHGPQQIYKKIVVSADNKTLLGGVLVGDSQEYATL
LQMMLNGMALPAQPESLILPTMAGGAPKGLGVAALPESAQICSCHNVSKADICAAVSNGA
GDMGAIKACTKAATGCGGCSALVKQVMEYQLQEQGVEVKKDICEHFPYSRQEIYHLVRVN
HIRSFEQLISRYGHGHGCEICKPLAASVLASCWNEYLLKPAHLPLQDTNDRYFANIQKDG
TYSIVPRVPAGEITPDGLIAIGQVAKRYQLYSKITGGQRIDLFGARLEELPAIWEELVAA
GFETGHAYGKSLRTVKSCVGSTWCRYGVQDSTGLAIELENRYKGLRSPHKIKMAVSGCTR
ECAEAQSKDIGVIATDKGWNLYVCGNGGMKPRHADLFASDLSRETLIRTIDCLLMFYIRT
ADRLQRTSTWMDNLEGGIEYLRDVILNDSLGLNDELEKEMVSVVDTFQCEWQTTLNSPDR
LALFRSYVNSEQPDEAVQRQTLRGQLQPVSEVVHLPTVAPVKPWQAVCNISEIPAQAGIG
ARLGEQQIALFRFGDAIYALDNLEPGSDANVLSRGIVGDAAGEPIVISPLYKHRIRLRDG
RTQDGEPAVRAWPVKVEQGTVWVGSQALIVRAEAS
NT seq
4068 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgacgtctgattgtgatcggcaacggcatgtccgctatccgcctggtggagcaa
atcgtggcgcaagcggcgggacgttttgccattaccgtttttggtgaagagccggtgctg
agttacaaccgcattttgctctcgccggtgttggcgggggaaaaacccgcccaggcgacg
cagttgcacgacgctgcgtggtacgtttcccacggcattgagatgctcacgggagaggcg
gtcctggaggtggacacgcagcgccagacggttcgctctgatagtcgcacgctcgaatat
gatgaactggtttttgccaccggctcatacccgtttatcccgccgattgacggccatcaa
cagccacatgtgcacggctttcgcaccctggcagatgtcgacgcgattcttggcggcgaa
ggccatgttgtggtacttggcggaggtttattgggggtggaagccgcggcggcactttgt
gcgcggggcatttccgtcactctgattcaccgtcagccatggctcatggatattcaactc
aacctgcaggcaggtgctttgcttgcggagcatctcgcacaacgggggatttgctgccag
ctaaattgcggcatcaaacgcattacggcgcaaagcgtagtgctggacaccggcgaggtt
atccccgccgggcgagtgattatcgccaccggcgtaaaacccaatatccggcttgcgcag
caggcgggtatttattgccagcgcggtatcaccgttgatgcacaactgcgtagcacgacg
ccctgcgtcagcgcattgggcgaatgctgcgaaatagacgggcaaacctgggggctggtg
gcaccttgtctgcaacaggccgacgttttagccgcccgtttatgcggtagcgctttaaac
gacttccactatcaggatcgcggcacgcgcctgaaagtgagcggaatcccgctattttcc
gcaggcgacattcgcagccagccggacacacgcgtgctcaccgcctttgatcccatcacc
agacattatcgctgcctgcatttgcgggacggcaagctggtgggcgcactgttaatgggc
gatatcacccctgctaatacactcaccgatattttactcagcgcggcgcccgttacgcct
gacgtgctgtttgatgaataccactctgatgagcagccgttggctgccggaaatgacgac
atgacaaaagcaacgctggtagtaattggtcacggcatggtcggacaccactttctggaa
cagtgtgtggcgcagaaactgcatcacagccatcacattgtggtgtttggcgaagaacgc
cacccggcgtatgaccgtgtgcatctgtcggaatatttcgcgggacgcagcgcgcagtcg
ctctcgatggtgcagggcgatttctttgcagagaacggtattgaactgcgttgcaacagt
aaaatcgttgagattgaccgccagcaacgggtggtgcgtgaccacgagggacgtgaaacc
tggttcgacaaactggtgctggcgaccgggtcatttccttttgtgccaccggttccgggt
aacgatctgccgggctgctttgtttaccgcacgcttgatgacctggacgccattgccgaa
cgggcccgcaatgccactcgcggtgtcgtgattggcggtggtttgctggggctggaagcg
gcaaatgcgctcaaacagttgggtcttgaaacgcatgtcgtggagttcgcgcccaatctc
atggcggtgcaactcgataacgcgggggcggcgatgctgcgcgaaaaaatcagcgatatt
ggcgtgcaggtgcataccagcaaatccacaacagcgattaccgacgttgacggtttgcag
cttaatttcgccgatggcgaaacgctcaataccgatctcatcgtcttctctgcgggtatc
cgtccgcaagatgcgctggcacgtagcagtgaactcgcacttggcgaacgcggtgggatt
gtgattaacgaccgttgccaaaccagcgacagcgcaatttatgccatcggcgaatgcgca
ctttgggaggggaaaattttcggtctggtcgcgccgggttaccaaatggcacgtgtaacg
gctgcaacccttgccgggcaggaatcagcattcctgggtgccgatatgagcactaaactg
aaattgctcggcgttgaagtggcctcatttggtgacgctcacgggcgcacgccaggctgc
cagagttaccagtggacccacggcccacagcaaatctacaaaaaaatcgtggtctctgca
gataacaaaaccctgctcggtggcgtactggtgggcgacagccaggaatacgctacgctg
ctgcaaatgatgctcaacggcatggcgctacccgcacaaccggaaagcctgattttgcca
acaatggcaggcggcgcgccaaaagggttgggtgtcgcggcattaccggaaagcgcacaa
atttgctcgtgccataacgtcagcaaagctgatatttgcgccgcggtaagcaacggcgcg
ggagacatgggcgcgattaaggcatgcaccaaagcggcaacgggctgcggcggctgttcg
gcactggtgaaacaggtgatggaataccagttacaagagcagggcgtggaggtgaaaaag
gacatctgcgaacacttcccgtactcgcgccaggaaatctaccatctggtgcgcgtcaac
catatccgcagttttgagcaactcattagccgctatgggcacggtcatggctgtgaaatc
tgcaagccgctggcggcttcggtgctggcgtcgtgttggaacgaatatttactcaaacct
gcccatttgccgttacaggacaccaatgaccgctacttcgccaacatccagaaagatggc
acctactccattgtgccgcgtgttccggcaggcgaaatcacacccgatggtttaattgcg
attggtcaggtggcaaaacgctaccagctatacagcaaaattaccggcggccagcgaatc
gacctgtttggcgcccgcctggaagagctgccggcgatttgggaagagctggtcgcggca
ggttttgaaaccggacacgcctacggtaaatcgctgcgcaccgtgaaatcctgcgtcggt
tcgacctggtgccgttacggcgtacaagactcaacggggctggcgattgaactcgagaac
cgctacaagggcctgcgttcgccgcacaaaatcaaaatggcggtctccggttgcacccgg
gaatgtgccgaagcacagagcaaagatatcggcgtgattgcgacagacaagggctggaac
ctctacgtttgcggaaatggcggcatgaaaccgcgccatgcggacctgtttgccagcgac
ctgagtcgcgaaacgttgattcgtaccatcgactgcctgctgatgttttacatccgcact
gccgaccgtttgcagcgcaccagcacctggatggataacctcgaaggcggcattgaatac
ctgcgcgatgtgattcttaacgacagcctcggcctgaacgacgagctggaaaaagagatg
gtcagcgtagtcgataccttccagtgcgaatggcaaaccacgctcaacagcccggatcgc
ctggcattgttccgctcttacgtgaacagcgaacaaccggacgaagcggtgcagcgtcag
actctgcgcggccagttacaaccggtcagcgaagtggtgcatctgccaacggtcgcgcca
gtcaaaccgtggcaggcagtttgtaatatcagcgaaatcccggcgcaggcgggaatcggc
gcacgtctgggggagcagcaaatcgctctgttccgttttggcgatgcgatttacgcgctc
gataacctcgagccgggcagcgatgccaacgttttgtcgcgaggaattgtcggtgacgcc
gccggtgagccgattgtcatttccccgctctataaacatcgcattcgcttgcgtgatggg
cgaacgcaggatggcgaacctgccgttcgcgcctggccggtgaaagtggaacaaggcacc
gtgtgggtaggaagccaggcgttgattgtgcgtgcggaggcatcatga
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