Buttiauxella agrestis: BADSM9389_28980
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Entry
BADSM9389_28980 CDS
T06676
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
bage
Buttiauxella agrestis
Brite
KEGG Orthology (KO) [BR:
bage00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bage03032
]
BADSM9389_28980
03400 DNA repair and recombination proteins [BR:
bage03400
]
BADSM9389_28980
Enzymes [BR:
bage01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
BADSM9389_28980
DNA replication proteins [BR:
bage03032
]
Prokaryotic type
DNA Topoisomerases
BADSM9389_28980
DNA repair and recombination proteins [BR:
bage03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BADSM9389_28980
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
BCG10223
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Position
complement(3126111..3128759)
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AA seq
882 aa
AA seq
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MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN
KAYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM
RYTEIRMSKIAHELMADLEKDTVDFVDNYDGTERIPDVMPTKIPNLLVNGSSGIAVGMAT
NIPPHNITEVINGCLAFIEDEDITVEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKI
YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKDKRVEGISALRDESDKDG
MRIVIEIKRDAVGEVVLNNLYSQTQLQTSFGINMVALHQGQPKIMNLKDILSAFVRHRRE
VVTRRTIFELRKARDRAHILEGLAIALANIDPIIELIRHSPNAAEAKAGLIARSWDLGNV
SAMLERAGDDAARPEWLEPEFGIRDGQYFLTEQQAQAILDLRLQKLTGLEHEKLLDEYKE
LLEQIAELLHILGSAERLMEVITEELVAMRDQFGDKRRTEITANTSDINIEDLINREDVV
VTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILLFSSRGRLY
WMKVYQLPEASRGARGRPIVNLLPLEANERITAILPVREYAEGINVFMATASGTVKKTAL
TDFSRPRSAGIIAVNLNEGDELIGVDLTDGSNEAMLFSAAGKVVRFKEDAVRTMGRTATG
VRGIKLAGEDKVVSLIIPRGEGSILTVTQNGYGKRTAAEEYPTKSRATQGVISIKVTERN
GSVVGAVQVEDTDQIMMITDAGTLVRTRVSEVSVVGRNTQGVILIRTADDEHVVGLQRVA
EPVDEEELDAIDGSVAEGDDEIAPEADTDEAADDEASDDADE
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaccttgccagagaaattacaccggtcaacattgaggaagagcttaagagctca
tatctggattacgcgatgtcggttattgtcggccgcgcactgccagatgtccgcgatgga
ctcaagccggtacaccgtcgcgtactttacgccatgaacgtattgggcaatgactggaat
aaagcgtacaaaaaatccgcccgtgttgttggtgacgtaatcggtaagtatcaccctcat
ggtgataccgctgtttatgacactatcgtgcgtatggcgcagccattctcattgcgttac
atgctggtagatggccagggtaacttcggctctgtagatggtgactccgccgcggcgatg
cgttatacggaaatccgtatgtcgaaaatcgcccacgagctgatggccgatctcgaaaaa
gacacggtagacttcgtcgataactacgacggcaccgagcgaattcctgatgttatgcca
accaaaatacctaacctgctggtaaacggttcatccggtatcgcagtcggtatggcaact
aacatcccgcctcataacattacggaagtgatcaacggttgcctcgcgtttattgaagac
gaagacattaccgttgaagggctgatggaacacatcccaggcccggacttcccaactgct
gcaatcatcaatggccgtcgtggcattgaagaagcgtaccgtactggccgtggcaagatt
tacatccgcgctcgcgcagaagtagaagctgatgctaaaaccggtcgcgaaaccatcatc
gttcatgaaattccataccaggttaacaaagcacgcctgattgagaaaatcgctgaactg
gtgaaagacaaacgcgttgagggcattagcgctctgcgtgacgagtctgataaagacggc
atgcgcattgtcatcgaaatcaaacgcgatgcagtgggcgaagtggttctgaataatctt
tattctcagactcagcttcagacttccttcggtatcaacatggttgcgctgcaccagggc
caaccgaagatcatgaacctgaaagacattctttctgcgttcgtgcgtcaccgtcgtgaa
gttgttacgcgtcgtactattttcgaactgcgtaaagcacgcgatcgtgcgcacatcctt
gaaggtctggcgatcgctctggcgaacatcgacccaatcatcgaactgatccgtcattct
ccaaatgcggcagaagcgaaagccggcctgatcgcccgttcatgggatctgggcaatgtt
tccgcgatgctggaacgtgcaggcgatgacgctgcgcgccctgaatggctggaaccagag
ttcggtattcgtgatggtcaatatttcctgaccgagcaacaagcacaggcgattctggat
ctgcgtttgcagaaactgactggccttgagcatgaaaaactgctcgacgaatacaaagag
ctgctggagcagatcgctgagttgctgcacattctgggcagcgctgaacgtctgatggaa
gtgatcactgaagagctggttgcgatgcgcgatcagtttggcgacaagcgtcgtacagag
atcactgcgaatacctctgatatcaacattgaagatttgatcaaccgcgaagatgtggtt
gtgacgctgtcccatcagggctatgtgaaatatcagccgctgaccgactacgaagcacaa
cgtcgtggtggtaaaggtaaatccgcagcacgtattaaagaagaagacttcatcgaccgc
ctgttggttgccaatacccacgataccattctgctgttctccagccgtggtcgtctgtac
tggatgaaggtttatcaattgccggaagcgagccgtggtgcgcgtggccgtccaattgtt
aacctgctgccactggaagcaaatgaacgtattaccgcgattctgccggttcgtgagtat
gccgaaggcattaacgtattcatggctaccgcaagcggcaccgtgaagaaaactgcgttg
accgacttcagccgtccacgttcagcaggcatcattgccgttaacctcaacgagggtgac
gagctgattggtgttgatttgaccgacggtagcaacgaagccatgttgttctcggctgcg
ggtaaagtggtgcgcttcaaagaagacgccgttcgtaccatgggccgtactgcaacaggt
gttcgcggtattaaactggcgggcgaagacaaagtcgtttccctgattattccgcgcggt
gaaggttcaatcctgaccgtgacgcagaatggttatggtaagcgtactgcggctgaagaa
tatccgaccaagtcgcgtgcgactcagggcgttatctccatcaaagtgaccgagcgcaac
ggcagcgttgttggtgcggtgcaggtggaagataccgaccagattatgatgatcaccgat
gccggtactctggttcgtactcgcgtttctgaagtcagtgtcgttggccgtaacacccag
ggcgttatcctcatccgtaccgcggacgatgaacacgtagtgggcctgcaacgtgttgca
gaaccggtagacgaagaagagctggatgctatcgacggtagcgttgccgaaggtgatgat
gaaatcgcaccagaagcagacactgatgaagctgcagatgatgaagcctccgacgacgcg
gacgaataa
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