Buttiauxella agrestis: BADSM9389_32540
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Entry
BADSM9389_32540 CDS
T06676
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
bage
Buttiauxella agrestis
Brite
KEGG Orthology (KO) [BR:
bage00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bage03400
]
BADSM9389_32540
DNA repair and recombination proteins [BR:
bage03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BADSM9389_32540
Archaeal homologous recombinant proteins
BADSM9389_32540
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
BCG10572
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Position
3521416..3522633
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AA seq
405 aa
AA seq
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MRIIHTSDWHLGQNFYTKSRGPEHQAFLEWLLQAAVEHDVDAIIVAGDIFDTGSPPSYAR
ELYNRFVVQLQQTGCSLVVLAGNHDSVATLNESRELMACLNTYVIASARHDASQQAIVLN
AKSGEPGAILCPIPFLRPRDIQNSQAGLSGHEKQRSLMEAISEHYQQCYTAACELRADAK
LPIIATGHLTTVGVTKSDAVRDIYIGTLDAFPAQHFPAADYIALGHIHRAQLIGGTEHIR
YSGSPIPLSFDETGKNKSVYLVEFAEGVLHEVTPLTVPVSQPLAVIKGSLSEIEQQLAQW
RDAPAEPKVWLDIEIATEEYLHDMQRHIQQLTETLPVEVVLLRRSREQRERVIAQQHKET
LSELTVEEVFERRLVQEDTSEERAQRLRTLFAQTVASLHDVEEEA
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattattcacacttcagactggcatcttggtcaaaatttttataccaaaagccgt
gggccagagcaccaggcgtttcttgaatggttgcttcaagccgcagtcgagcatgatgtg
gatgcgataattgtcgcaggcgatatttttgataccggctcgccgccaagttacgcacgc
gaattgtataaccgttttgtggtgcaacttcagcaaacaggctgttctctcgtggtgctg
gcgggaaatcatgattccgtagccacgctgaatgaatctcgtgaattaatggcatgcctg
aatacttatgtcattgccagtgcgcggcatgatgccagccagcaggctatcgtgctcaac
gctaaatcgggtgaaccgggtgccattctctgtccgattccattcctgcgtccacgggat
attcaaaatagccaggcggggctttccggccacgaaaagcagcgttcgttgatggaagcc
atcagcgaacattaccagcagtgttacaccgccgcctgcgaattacgcgctgatgcgaag
ctgccgattatcgcgaccggccatttaaccaccgttggtgtaaccaaaagtgatgcggtg
cgcgatatttacatcggcacgctggatgctttcccggcgcagcatttccccgcagccgac
tacatcgcactcggccatatccatcgtgcccaactcattggtggtactgaacatattcgc
tatagcggctcgcccatcccgttaagttttgacgaaacaggcaagaacaaaagtgtttat
ctggttgagtttgccgaaggcgtgcttcatgaagtgactccgctgacggtgcctgtcagc
cagcctttagcagtcatcaaaggttctctgagtgaaatcgaacagcaactcgcgcagtgg
cgcgatgcaccagcagaacccaaagtttggctggatattgaaatcgctaccgaagaatat
ctgcatgatatgcagcgccatattcagcaattaaccgaaacgctccccgtcgaagtggtg
ttgctgcgccgcagccgcgaacaacgcgaacgagttatcgcccagcaacataaagaaacg
ctgagtgagctgacggttgaagaggtttttgagcgccgcctggttcaggaagacacttcc
gaagaacgcgcacaacgtttgcgaacgctatttgcccaaacggtggcgagcctgcatgac
gtggaggaagaagcatga
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