Buttiauxella agrestis: BADSM9389_33710
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Entry
BADSM9389_33710 CDS
T06676
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bage
Buttiauxella agrestis
Pathway
bage03030
DNA replication
bage03430
Mismatch repair
bage03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bage00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BADSM9389_33710
03430 Mismatch repair
BADSM9389_33710
03440 Homologous recombination
BADSM9389_33710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bage03032
]
BADSM9389_33710
03400 DNA repair and recombination proteins [BR:
bage03400
]
BADSM9389_33710
Enzymes [BR:
bage01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BADSM9389_33710
DNA replication proteins [BR:
bage03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BADSM9389_33710
DNA repair and recombination proteins [BR:
bage03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BADSM9389_33710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
BCG10683
LinkDB
All DBs
Position
complement(3641205..3644687)
Genome browser
AA seq
1160 aa
AA seq
DB search
MAEPRFVHLRVHSDYSMVDGLAKTAPLVKKAAEMGMPAIAITDFTNLCGLVKFYGAAHGV
GLKPIIGADFNVANELLGDELSHLTVLAVDNVGYQNLTLLISKAYQRGYGAAGPVIDRTW
LAELNEGLILLSGGRMGDIGKNLLRGNTAQLDLCLEFYQQYFADRFYLELIRTGRPDEET
YLHAAVALADERGLPVVATNDVRFIESTDFDAHEIRVAIHDGFTLDDPKRPRNYSSQQYL
RTEEEMCELFSDIPEALENSVEIAKRCNVTVRLGEYFLPQFPTGEMSTEDFLVMKSKEGL
EDRLEFLFKDPEERAEKRVPYDERLDIELKVINQMGFPGYFLIVMEFIQWSKDNGVPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDIDFCMEKRDRVIDHVAE
MYGREAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLIPPDPGMTLAKAFEAEPQ
LPEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDDQGQNPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIIDWALKMINPRRAKQGLEPIDIAAIPLEDKKSFDML
QRSETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREA
ISYPDIQWQHESLKPVLEPTYGIILYQEQVMQIAQVLAGYSLGGADMLRRAMGKKNPVEM
AKQRGGFEDGAKSRGIDGELAIKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTEKIVGLVDECWRMGLKILPPDINSGLYHFHVNDDGEIVYGIGAIKG
VGEGPIEAIIEARNEGGYFRELFDLCARADVKKLNKRILEKLVMSGAFDRLGPHRAALMN
ALPDALKAADQHAKAEAIGQVDMFGVLADEPEQVEQSYASVTPWPEQVVLDGERETLGLY
LTGHPITQYLKEIERYVGGMRLKEMHPTERGKMTTAAGLVIASRVMVTKRGNRIGICTLD
DRSGRLEVMLFTDALEKYQHLLEKDRILIVSGQVSFDDFSGGLKMTAREVMDIDEAREKY
ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQRADARARLRFGAAWRVSPSD
RLLNELRSLIGPEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaccacgtttcgtacacctcagggtgcacagtgactattccatggttgatggc
ctggcgaaaaccgctccgctggtaaagaaagccgcggaaatggggatgccagctattgct
atcaccgatttcaccaacctttgcgggctggtgaagttctatggtgccgcgcatggcgtg
ggcctcaagcccattattggtgctgactttaacgtggcaaacgaattgctgggtgatgaa
ctcagccatttaaccgtgctcgctgttgataatgtcggttatcaaaatctgactttgctc
atctcgaaagcctatcaacgtggttatggtgctgcgggaccggttatcgaccgcacctgg
cttgccgagttaaacgaagggctgatcctgctttctggcgggcgcatgggggatattggc
aaaaacttgttgcgtgggaatacggcacagcttgatttgtgtctggaattctaccagcag
tattttgccgatcgcttctatctggaactgattcgtaccggtcgtcctgatgaagaaact
tatttgcacgccgccgtcgctctggcagacgaacgcggcttaccggttgttgcaaccaac
gacgtaaggttcattgagtccacagactttgatgcccatgaaatccgcgtggctatccac
gatggatttacgctggatgaccctaagcgcccccgcaattactcttcacagcagtacctg
cgtaccgaagaggagatgtgcgagctgttctccgatattccggaagcgttggaaaacagt
gtagaaatcgccaagcgttgtaacgtcacggtgcgtctgggcgaatacttcctgccacaa
ttcccgacgggcgaaatgtctaccgaagacttcctggtcatgaaatcgaaggaagggctg
gaagatcgtctggagttcttgtttaaagatcctgaagagcgtgcggaaaaaagagtgccg
tacgatgagcgtctggatattgagcttaaagttatcaaccagatgggcttcccgggctac
ttcctgatcgttatggaatttatccagtggtcgaaagacaacggcgtgcctgttggccct
ggccgtggttctggtgccggttctttggtggcttatgccctgaagatcaccgaccttgat
cccctggagtttgatctactttttgaacgtttccttaacccggaacgtgtttcgatgccg
gacttcgatatcgatttctgtatggaaaaacgagatcgggttatcgatcacgttgcagaa
atgtacgggcgcgaagcggtatctcagattattacctttggtacgatggcggcaaaagcg
gttatccgcgatgtgggccgtgtactggggcacccgtacggcttcgtcgatcgtatttct
aagcttatcccgccagatccgggtatgacgctggcaaaagcgtttgaagccgagccgcag
cttcctgaaatttacgaagctgacgaagaagtaaaagcgcttattgatatggcgcgtaag
ctcgaaggtgtcacgcgtaacgccggtaagcatgccggtggggtggttattgcaccgacc
aaaattaccgattttgcgccgctttattgtgatgaccaggggcaaaacccggtcacccag
tttgacaaaaacgatgtggaatatgcagggctggtgaagtttgacttccttggcctgcgt
acgctcaccatcatcgactgggcgctgaagatgatcaacccgcgtcgggcaaagcagggt
ttagagccgatagatatcgccgctatcccgctcgaggataagaaaagcttcgacatgctg
caacgctcggaaaccactgcggtgttccagcttgaatctcgcggcatgaaagatttgatc
aagcgtctgcaacccgactgcttcgaggatatgattgcattggtggcgctgttccgccct
gggccgttgcaatcaggcatggttgataactttattgaccgtaagcacgggcgtgaagct
atttcctatccggatattcagtggcagcatgaaagcctgaaaccggtgctggaaccgacc
tacggcattatcctgtatcaagaacaggttatgcagattgcacaggtgctggcggggtac
tcgctgggcggtgcggacatgttgcgtcgtgcgatgggtaaaaagaacccggtcgagatg
gcgaagcagcgtggcggttttgaagatggcgcgaagtctcgtggcattgacggtgagctg
gcgattaaaatcttcgacctggttgaaaaatttgccggttacggatttaacaaatctcac
tccgctgcgtatgcgctggtttcttaccagactctatggttaaaagctcactatccggca
gaattcatggccgcggtgatgactgcggatatggataacaccgagaaaatcgtcggcctg
gtggatgaatgctggcgcatgggcctgaaaatcttgccaccggatattaactccgggcta
taccacttccacgtcaatgacgacggggaaattgtttacggcattggtgcgattaaaggt
gtgggtgaaggcccgattgaagcgataattgaggcgcgtaacgaaggcggttatttccgc
gaattgttcgatctctgtgcgcgtgctgacgttaaaaaactcaataaacgtatccttgaa
aaattagtgatgtccggggcgtttgaccgccttgggccgcatcgggcagcccttatgaat
gcgctgcccgatgcgctgaaagctgccgatcagcacgcgaaagccgaagctatcggccag
gtggatatgttcggtgtactggctgatgagccggagcaagttgaacaatcctacgctagc
gtgactccgtggcctgaacaagtggtactggatggtgaacgtgaaacgttaggtttatac
ctgaccggccacccaatcactcagtatctaaaagaaatcgagcgctatgtcggtggcatg
cgcctgaaagagatgcacccgacagaacgtggtaaaatgaccacggctgcgggtctggtg
attgcttcgcgggtgatggttaccaaacgtggcaatcgcattggcatctgcactctggat
gaccgttctggtcgcctggaagtgatgctattcacagatgcgttagaaaagtaccagcat
ctgttggaaaaagaccgtatcctgatcgtcagcggacaggtcagctttgatgacttcagc
ggtggccttaaaatgaccgctcgcgaagttatggacatagacgaggcccgcgaaaagtat
gcgcgtgggcttgctatctcgctgacggacaggcaaattgatgaccagcttttgaaccgt
ctccgtcagtctctggaaccccatcgttcggggaccattccagtacatctctactatcag
agagcggatgcacgagcacgtttgcgttttggcgcagcatggcgtgtatctcctagcgat
cgtttgctcaatgagcttcgctcgctgataggcccggagcaggtggaactggagtttgac
taa
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