Buttiauxella agrestis: BADSM9389_40150
Help
Entry
BADSM9389_40150 CDS
T06676
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
bage
Buttiauxella agrestis
Pathway
bage03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bage00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BADSM9389_40150 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bage03019
]
BADSM9389_40150 (rhlB)
Enzymes [BR:
bage01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BADSM9389_40150 (rhlB)
Messenger RNA biogenesis [BR:
bage03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BADSM9389_40150 (rhlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CCDC138_C
ERCC3_RAD25_C
AAA_22
Motif
Other DBs
NCBI-ProteinID:
BCG11300
LinkDB
All DBs
Position
4344988..4346259
Genome browser
AA seq
423 aa
AA seq
DB search
MSKTHLTEQKFSDFALHPKVIEALENKGFHNCTPIQALALPLTLANRDVAGQAQTGTGKT
MAFLTSTFHYLLSHPVPENRQVNQPRALIMAPTRELAVQIHSDAEPLAQSTGLKLGLAYG
GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIR
WLFRRMPPVTQRLNMLFSATLSYRVRELAFEQMNNAEYVEVEPEQKTGHRIQEELFYPSN
EEKMRLLQTLIEEEWPDRAIIFANTKHRCEDIWGHLAADGHRVGLLTGDVAQKKRLRILE
EFTRGDLDILVATDVAARGLHIPLVTHVFNYDLPDDCEDYVHRIGRTGRAGESGHSISLA
CEDYALNLSAIETYIGHSIPVSKYKTEALLSELPPPKRLTRSRPGNGPRRNGGASRGNRR
RTG
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaacacatttgaccgaacagaagttttccgacttcgccctgcaccctaaggtg
attgaagcccttgaaaataaagggttccataactgcaccccaattcaggcactggcacta
ccgctgacactagcgaatcgtgacgttgcagggcaggcgcaaaccggtactggcaaaacg
atggcgtttttaacgtcaacgttccattatttactctctcacccggttccagagaatcgc
caggtgaaccagccgcgtgctttaattatggcaccgactcgtgaactggcagtgcaaatt
cactcagatgcagagccactcgcgcaatcaaccggcctgaaactcggcctggcatacggt
ggtgatggctacgacaaacagcttaaagtgctggaaagtggtgttgatattcttatcggc
acgacgggtcgtttgatcgattacgcaaaacaaaaccacattaacttaggtgcaattcag
gttgtggtgctcgatgaagccgatcgcatgtacgatctgggctttataaaagatattcgc
tggttgttccgtcgtatgccacccgtcactcaacgcctgaacatgctgttctccgctaca
ttatcttaccgtgtgcgtgagttggcgtttgagcaaatgaacaacgcggaatacgttgaa
gttgaaccggagcaaaaaaccggtcatcgcatccaggaagagctgttctacccttctaat
gaagagaaaatgcgcctgttgcagacactcatcgaagaagagtggccagaccgcgcaatt
atctttgctaacaccaaacaccgttgtgaagatatctggggccacctcgccgctgatgga
catcgtgttggtctgttaactggcgatgttgcacagaaaaaacgcctgcgcattcttgaa
gaattcactcgtggcgatctcgatattctggtcgcaaccgacgtagcagcacgtggcttg
catattcctttagtcactcatgtgttcaactacgatctgccggacgattgcgaagactac
gttcaccgtattggccgtactggccgtgctggcgaaagcggtcattccattagcctggca
tgtgaagactacgcgctgaacctgtccgctattgaaacctacatcggtcactcaatcccg
gtcagcaagtacaaaactgaagcactgttaagcgaacttcctccaccgaaacgcctgact
cgttcccgcccgggtaacggtcctcgtcgtaatggtggcgcttcccgtggtaatcgccgt
cgcacaggttaa
DBGET
integrated database retrieval system
